DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Oamb and DopEcR

DIOPT Version :9

Sequence 1:	NP_001262774.1	Gene:	Oamb / 43982	FlyBaseID:	FBgn0024944	Length:	751	Species:	Drosophila melanogaster
Sequence 2:	NP_001014559.1	Gene:	DopEcR / 38539	FlyBaseID:	FBgn0035538	Length:	322	Species:	Drosophila melanogaster

Alignment Length:	160	Identity:	49/160 - (30%)
Similarity:	88/160 - (55%)	Gaps:	16/160 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 NETECEDLIKSVKWTEPANLISLAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVAD 66
            :.::.|.|.|:|       |||:     :.|.::..|.|:||..........|.|:::::||:||
  Fly     9 DNSKVEALTKAV-------LISI-----LGVAIVLSNLLIIATYANFKGPTEVINYYLLSLAIAD 61

  Fly    67 LLVGLAVLPFSATWEVFKVWIFGDLWCRI--WLAVDVWMCTASILNLCAISLDRYVAVTRPVTYP 129
            ||.||.|:|||....:...|::||:.||.  :|.|.:|  ..|:.....||:|||:||.:|:.|.
  Fly    62 LLCGLLVVPFSVYPALTGEWMYGDIVCRFTGYLEVTLW--AVSVYTFMWISVDRYLAVRKPLRYE 124

  Fly   130 SIMSTKKAKSLIAGIWVLSFFICFPPLVGW 159
            ::.:..:.:..:...|:.:..:|.||::|:
  Fly   125 TVQTKTRCQCWMVFTWISAALLCCPPILGY 154

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Oamb	NP_001262774.1	7tm_4	29..>154	CDD:304433	39/126 (31%)
Oamb	NP_001262774.1	7tm_1	37..>181	CDD:278431	41/125 (33%)
DopEcR	NP_001014559.1	7tm_classA_rhodopsin-like	18..289	CDD:410626	47/151 (31%)
		TM helix 1	18..42	CDD:410626	10/35 (29%)
		TM helix 2	51..73	CDD:410626	12/21 (57%)
		TM helix 3	89..111	CDD:410626	6/23 (26%)
		TM helix 4	134..150	CDD:410626	2/15 (13%)
		TM helix 5	174..197	CDD:410626
		TM helix 6	230..252	CDD:410626
		TM helix 7	264..289	CDD:410626
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45460606
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840