DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and CG13579

DIOPT Version :9

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001261169.1 Gene:CG13579 / 37905 FlyBaseID:FBgn0035010 Length:716 Species:Drosophila melanogaster


Alignment Length:702 Identity:131/702 - (18%)
Similarity:216/702 - (30%) Gaps:237/702 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ANLISLAVLEFINVLVIGGNCLVIAAVFCSNK-----LRSVTNFFIVNLAVADLLVGLAVLPFSA 78
            |..|...::..:.:.|||.|||||..:  :|:     :.....:.:.:||:.||.:||.:.||..
  Fly    36 AETIEAVLILVLTLGVIGANCLVIFVI--NNRRYAAYIHQQPRYLLTSLALNDLTIGLLITPFGL 98

  Fly    79 TWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAG 143
            ...:|..|.:|:::|:|...:...:...|.:.|..:::|||:....|..|....|.|...::::.
  Fly    99 MPALFHCWPYGEIFCQIQALLRGALSQQSAVILVCMAVDRYMCALHPRRYYQHSSKKGCVAILSL 163

  Fly   144 IWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPSP 208
            .|::|..: |..||            .|||   .|:..|         ||.:.:           
  Fly   164 TWIISLTV-FGFLV------------LPKG---YYFNNT---------GLMACE----------- 192

  Fly   209 PHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPPQ 273
                                                                          |..
  Fly   193 --------------------------------------------------------------PFY 195

  Fly   274 NRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFKTTKG 338
            ::|                 .|.:.|....::....|:::.|                       
  Fly   196 SKP-----------------SYRILSTCALYFPTTMVLMYCY----------------------- 220

  Fly   339 SKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATR-RLHHHDKI 402
                ||.|...|..|                |..|...|.....|.|......|.: ::|.|.: 
  Fly   221 ----GSSFHMSRFRL----------------NDPTMPLTAAAHHPHPHPHPTAAQQLQMHQHQQ- 264

  Fly   403 KISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVASSCYL 467
                 :.....:.....||...|....|       |.|..|.        :.....||       
  Fly   265 -----HHQQAGMHSHLYHGHSHHPSHPS-------HPNHPNH--------HGHPHHHG------- 302

  Fly   468 QVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETKAAKTLAIIVGMFIFCW 532
                  |.:....|.....|.:|.....| |:.::.:..|.|.....|  ::::|.|...||...
  Fly   303 ------PPVMGHLSMAMSMGLAGMPNMTN-KITKKIVPIQEKNSSGST--SRSMAAISLGFIVMV 358

  Fly   533 CPFFTMYIIRPFCQDCVDPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRII-CRCFCSRQS 596
            .|:....|:.......:.|.|..::.|....||..||.:|.|.:.|||...:::: .:||....:
  Fly   359 TPWTIQEIVTACTGSKLPPFLDFLVTWTALSNSLWNPFMYWLLNSDFRRMSRQLMPNKCFPHEDT 423

  Fly   597 VSLKS-----SRRGSDMSAIRIRARTPSITPSAAAHSFGDESELHHSEMSNDPRXRSFGPSSSSQ 656
            ...||     :....:::.:.|....||..|...|...|.                  ||||...
  Fly   424 PEHKSGCCHINANDFEITTLPIPPEPPSSRPPGGAGGGGG------------------GPSSGGP 470

  Fly   657 SSLGGLRKTSLKVPVYEICHPLVMETACYSYVEATSDGSASCSVAGGNGGSV 708
            ||.||: .:|:...|..||.        .|...:.| .|||..:.|..||.|
  Fly   471 SSGGGV-ASSIGGSVLGICG--------RSRTNSLS-RSASQYIRGTMGGGV 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 33/129 (26%)
7tm_1 37..>181 CDD:278431 37/148 (25%)
CG13579NP_001261169.1 7tm_4 51..>148 CDD:304433 28/98 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460605
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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