DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and mAChR-A

DIOPT Version :9

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_523844.2 Gene:mAChR-A / 37892 FlyBaseID:FBgn0000037 Length:805 Species:Drosophila melanogaster


Alignment Length:804 Identity:159/804 - (19%)
Similarity:248/804 - (30%) Gaps:347/804 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 NLISLAVLEFI----NVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPFSATW 80
            :|.|:.|:.|:    :.:.:.||.:|:.:.....:|::::|:|:.:||:||..:|...:|..|..
  Fly   100 SLASMVVMGFVAAILSTVTVAGNVMVMISFKIDKQLQTISNYFLFSLAIADFAIGAISMPLFAVT 164

  Fly    81 EVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAGIW 145
            .:...|..|.:.|..|||:|.....||:|||..||.|||.:||||:||.:..:|.:|..:|...|
  Fly   165 TILGYWPLGPIVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTNRAAVMIGAAW 229

  Fly   146 VLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPSPPH 210
            .:|..:..|.:..|         .|.:|..|:                                 
  Fly   230 GISLLLWPPWIYSW---------PYIEGKRTV--------------------------------- 252

  Fly   211 IGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPPQNR 275
                    |.|          |..|..|::....|..|                           
  Fly   253 --------PKD----------ECYIQFIETNQYITFGT--------------------------- 272

  Fly   276 PQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFKTTKGSK 340
                                    ||.:||.|:.:|.|.||||:|...:..:.:.......|.|.
  Fly   273 ------------------------ALAAFYFPVTIMCFLYWRIWRETKKRQKDLPNLQAGKKDSS 313

  Fly   341 GIGSRFEEQRLTLRIHRGR------GSNQQDS----------------------------MHS-N 370
            ...:..:|..:......|.      |.|..|:                            ||| .
  Fly   314 KRSNSSDENTVVNHASGGLLAFAQVGGNDHDTWRRPRSESSPDAESVYMTNMVIDSGYHGMHSRK 378

  Fly   371 GSTQSTTT---------------------------------------------TLGTPSPERLSK 390
            .|.:||.|                                             |:.||....:|:
  Fly   379 SSIKSTNTIKKSYTCFGSIKEWCIAWWHSGREDSDDFAYEQEEPSDLGYATPVTIETPLQSSVSR 443

  Fly   391 YATRRLHHHD-------------KIKIS------VSYPSSENISELA------------------ 418
            ..:..:...:             .|.:|      :..|...:||:|.                  
  Fly   444 CTSMNVMRDNYSMGGSVSGVRPPSILLSDVSPTPLPRPPLASISQLQEMSAVTASTTANVNTSGN 508

  Fly   419 GHGDVGHERRQSGNALFAVHYNGT----------------------------NGRESTESQLYR- 454
            |:|.:.:....|.|...||:.||.                            |.|..::..:|. 
  Fly   509 GNGAINNNNNASHNGNGAVNGNGAGNGSGIGLGTTGNATHRDSRTLPVINRINSRSVSQDSVYTI 573

  Fly   455 --QQQQHGVASSCYLQVGKG--------------------------------------------- 472
              :....|.:|:.....|.|                                             
  Fly   574 LIRLPSDGASSNAANGGGGGPGAGAAASASLSMQGDCAPSIKMIHEDGPTTTAAAAPLASAAATR 638

  Fly   473 --LPE--------LARRQSNT----------------SEAGG---SGHSRPANKKMGRRNI---- 504
              ||.        |.||.|:.                .:|||   .|....|:..|..||.    
  Fly   639 RPLPSRDSEFSLPLGRRMSHAQHDARLLNAKVIPKQLGKAGGGAAGGGVGGAHALMNARNAAKKK 703

  Fly   505 -KAQVKRFRMETKAAKTLAIIVGMFIFCWCPFFTMYIIRPF--CQDCVDPLLFSVLFWLGYCNSA 566
             |:|.|  |.|:||||||:.|:..||..|.|:..:.:|:|.  |.||:...|:...:.|.|.||.
  Fly   704 KKSQEK--RQESKAAKTLSAILLSFIITWTPYNILVLIKPLTTCSDCIPTELWDFFYALCYINST 766

  Fly   567 VNPMIYALFSKDFRFAFKRII-CR 589
            :|||.|||.:..||..:.||: |:
  Fly   767 INPMCYALCNATFRRTYVRILTCK 790

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 42/128 (33%)
7tm_1 37..>181 CDD:278431 46/143 (32%)
mAChR-ANP_523844.2 7tm_4 117..>241 CDD:304433 42/123 (34%)
7tm_1 121..>314 CDD:278431 67/303 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460632
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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