DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and drd2b

DIOPT Version :10

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_922918.1 Gene:drd2b / 378719 ZFINID:ZDB-GENE-030910-2 Length:452 Species:Danio rerio


Alignment Length:628 Identity:167/628 - (26%)
Similarity:239/628 - (38%) Gaps:239/628 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNETECEDLIKSVKWTEPANLISLAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVA 65
            :|.|.||   ...::...|.|::|.:.     :::.||.||..||.....|::.||:.||:||||
Zfish    21 LNCTGCE---AKHQYNYYAMLLTLLIF-----VIVFGNVLVCMAVSREKALQTTTNYLIVSLAVA 77

  Fly    66 DLLVGLAVLPFSATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPS 130
            ||||...|:|:....||...|.|..:.|.|::.:||.|||||||||||||:|||.||..|:.|.:
Zfish    78 DLLVATLVMPWVVYLEVVGEWRFSKIHCDIFVTLDVMMCTASILNLCAISIDRYTAVAMPMLYNT 142

  Fly   131 IMSTKKAKS-LIAGIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLD 194
            ..|:|:..: :|:.:|||||.|..|.|.|.              |:|                  
Zfish   143 RYSSKRRVTVMISVVWVLSFAISCPLLFGL--------------NNT------------------ 175

  Fly   195 SIKDQGEASLPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTT 259
                                          |..|||.                            
Zfish   176 ------------------------------ATRDGSV---------------------------- 182

  Fly   260 ETEMDLDLLNAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVR 324
                                       ||:.|. .:|:||::.|||:|..:.|..|.:||     
Zfish   183 ---------------------------CEIANP-AFVVYSSIMSFYVPFIITLLVYVQIY----- 214

  Fly   325 TTRAINQGFKTTKGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLS 389
                                      :.||..|.|       :::..|.|.|......|..|:.:
Zfish   215 --------------------------VVLRKRRKR-------VNTKRSCQKTDADAQPPLKEKCT 246

  Fly   390 KYATRRLHHHDK------IKISVSYPSSENISELAGH-----GDVGHERRQSGNALFAVHYNGTN 443
                   |..|.      ||.:...|:....::|...     ||||.|.           ..||:
Zfish   247 -------HPEDVKLCTVIIKTNGGVPAKNKKAQLIKEVLHQGGDVGMEM-----------VAGTS 293

  Fly   444 GRESTESQLYRQQQQHGVASSCYLQV-------GKGLPELARRQSNTSEAGG------------- 488
            ..|..:           :|||..:.:       ..|.|..|..|||..|..|             
Zfish   294 PPEKKK-----------LASSLVVDLLATPPSPNHGSPSHAEYQSNGDEKNGHAKDVQSPKETKP 347

  Fly   489 -------SGHSR-PANKKMGRRNIKAQVKRFRMETKAAKTLAIIVGMFIFCWCPFFTMYIIRPFC 545
                   :|.:| ...|.|.:|.: :|.|    |.||.:.|||::|:||.||.|||..:|::..|
Zfish   348 VETQALPNGKTRTTVTKTMSKRKM-SQHK----EKKATQMLAIVLGVFIICWLPFFITHILKTHC 407

  Fly   546 QDCVDPL-LFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRII 587
            ..||.|| :::...||||.||||||:||..|:.:||.||.:|:
Zfish   408 TSCVVPLEMYNAFTWLGYVNSAVNPIIYTTFNVEFRKAFIKIL 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tmA_Octopamine_R 21..583 CDD:320191 159/602 (26%)
TM helix 1 22..48 CDD:320191 7/25 (28%)
TM helix 2 55..81 CDD:320191 14/25 (56%)
TM helix 3 93..123 CDD:320191 21/29 (72%)
TM helix 4 135..158 CDD:320191 10/23 (43%)
TM helix 5 292..321 CDD:320191 11/28 (39%)
TM helix 6 512..542 CDD:320191 15/29 (52%)
TM helix 7 551..576 CDD:320191 14/25 (56%)
drd2bNP_922918.1 7tm_GPCRs 33..446 CDD:475119 160/607 (26%)
TM helix 1 35..59 CDD:410628 9/28 (32%)
TM helix 2 68..90 CDD:410628 13/21 (62%)
TM helix 3 106..128 CDD:410628 15/21 (71%)
TM helix 4 152..168 CDD:410628 7/15 (47%)
TM helix 5 188..211 CDD:410628 8/23 (35%)
TM helix 6 380..402 CDD:410628 11/21 (52%)
TM helix 7 414..439 CDD:410628 13/24 (54%)

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