DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and HTR4

DIOPT Version :10

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001035263.1 Gene:HTR4 / 3360 HGNCID:5299 Length:428 Species:Homo sapiens


Alignment Length:603 Identity:131/603 - (21%)
Similarity:197/603 - (32%) Gaps:286/603 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LISLAVLEFINVLVIGGNCLVIAAVFCSNKLRSV-TNFFIVNLAVADLLVGLAVLPFSATWEVFK 84
            ::.|..|..:.::.|.||.||:.||....:||.: ||:|||:||.|||||.:.|:||.|...|..
Human    20 VVLLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIELVQD 84

  Fly    85 VWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAV-TRPVTYPSIMSTKKAKSLIAGIWVLS 148
            :||:|:::|.:..::||.:.||||.:||.||||||.|: .:|:.|.:.|:..:...::.|.||:.
Human    85 IWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRNKMTPLRIALMLGGCWVIP 149

  Fly   149 FFICFPPLV-GWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPSPPHIG 212
            .||.|.|:: ||.:                             :|:..:.::.:.          
Human   150 TFISFLPIMQGWNN-----------------------------IGIIDLIEKRKF---------- 175

  Fly   213 NGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPPQNRPQ 277
            |.|:.:.|                                                         
Human   176 NQNSNSTY--------------------------------------------------------- 183

  Fly   278 TISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFKTTKGSKGI 342
                     |....::.|.:..::.:||||..:|:..|:||                        
Human   184 ---------CVFMVNKPYAITCSVVAFYIPFLLMVLAYYRI------------------------ 215

  Fly   343 GSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLHHHDKIKISVS 407
                                                            |.|.:.|.|        
Human   216 ------------------------------------------------YVTAKEHAH-------- 224

  Fly   408 YPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVASSCYLQVGKG 472
                                                       |:...|:               
Human   225 -------------------------------------------QIQMLQR--------------- 231

  Fly   473 LPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETKAAKTLAIIVGMFIFCWCPFFT 537
                         ||.|..|||.:..      :....|.|.||||||||.||:|.|..||.|||.
Human   232 -------------AGASSESRPQSAD------QHSTHRMRTETKAAKTLCIIMGCFCLCWAPFFV 277

  Fly   538 MYIIRPFCQDCVDPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRIICRCFCSRQSVSLKSS 602
            ..|:.||....|...:::...||||.||.:||.:||..:|.||.||..|:|   |..:       
Human   278 TNIVDPFIDYTVPGQVWTAFLWLGYINSGLNPFLYAFLNKSFRRAFLIILC---CDDE------- 332

  Fly   603 RRGSDMSAIRIRARTPSI 620
                       |.|.|||
Human   333 -----------RYRRPSI 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tmA_Octopamine_R 21..583 CDD:320191 121/564 (21%)
TM helix 1 22..48 CDD:320191 9/25 (36%)
TM helix 2 55..81 CDD:320191 16/25 (64%)
TM helix 3 93..123 CDD:320191 16/30 (53%)
TM helix 4 135..158 CDD:320191 7/23 (30%)
TM helix 5 292..321 CDD:320191 9/28 (32%)
TM helix 6 512..542 CDD:320191 19/29 (66%)
TM helix 7 551..576 CDD:320191 10/24 (42%)
HTR4NP_001035263.1 7tmA_5-HT4 20..323 CDD:320184 121/564 (21%)
TM helix 1 21..47 CDD:320184 9/25 (36%)
TM helix 2 55..81 CDD:320184 16/25 (64%)
TM helix 3 93..123 CDD:320184 16/29 (55%)
TM helix 4 136..159 CDD:320184 7/22 (32%)
TM helix 5 189..218 CDD:320184 10/100 (10%)
TM helix 6 252..282 CDD:320184 19/29 (66%)
TM helix 7 291..316 CDD:320184 10/24 (42%)

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