DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and Dop2R

DIOPT Version :9

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001014758.2 Gene:Dop2R / 33007 FlyBaseID:FBgn0053517 Length:905 Species:Drosophila melanogaster


Alignment Length:669 Identity:167/669 - (24%)
Similarity:249/669 - (37%) Gaps:254/669 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 VLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPFSATWEVFKVWIFGD 90
            :|....:|.:.||.|||.:|.....|::|||:|||:||:|||||.:.|:||:..:.|...|...|
  Fly   381 ILILFPILTLFGNILVILSVCRERSLQTVTNYFIVSLAIADLLVAVVVMPFAVYFLVNGAWALPD 445

  Fly    91 LWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAGIWVLSFFICFPP 155
            :.|..::|:||...|:||.||.|||:|||:|||:|:.|....::::....|..:|.:|..|..|.
  Fly   446 VVCDFYIAMDVICSTSSIFNLVAISIDRYIAVTQPIKYAKHKNSRRVCLTILLVWAISAAIGSPI 510

  Fly   156 LVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPSPPHIGNGNAYNPY 220
            ::|                                                              
  Fly   511 VLG-------------------------------------------------------------- 513

  Fly   221 DPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPPQNRPQTISGSCPW 285
                                                           ||..|...|..       
  Fly   514 -----------------------------------------------LNNTPNREPDV------- 524

  Fly   286 KCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIY---RAAVRTTRAINQGF--KTTKGS--KGIG 343
             |...| ..::|||:|.|||||..:|:|.||.|:   |:..|..||..:..  :.|.||  :.|.
  Fly   525 -CAFYN-ADFILYSSLSSFYIPCIIMVFLYWNIFKALRSRARKQRAARKPHLSELTGGSVIENIA 587

  Fly   344 S--RFEEQRLTLRIHRGR------------GSNQQ----------DSMHSNGSTQSTTTTLGT-- 382
            .  |..|..|....|..|            |||::          |..|...:.:||...|.|  
  Fly   588 QTRRLAETALDSSRHASRILPDEAATNTASGSNEEEDENAISPDIDDCHVIVNDKSTEFMLATVV 652

  Fly   383 ---------------------PSPERLSKYATRRLHHHDKIKISVSYPSSENISELAG------- 419
                                 |:....|.||...:   |.:...|: |:|.:.:..|.       
  Fly   653 EETGNSVVAQITTQPQLVVADPNGNHDSGYAASNV---DDVLAGVA-PASASAATSAAPRSSGSP 713

  Fly   420 ------------HGDVGHERRQSGN--------ALFAVHYNGTNGRESTESQLYRQQQQHGVASS 464
                        ...|..:||.:|:        ||.:|..:.::                 ||..
  Fly   714 PDSPLPSGATLQRSSVSSQRRPTGDDSPKRGEPALRSVGVDNSS-----------------VAMK 761

  Fly   465 CYLQVGKGLPE---LARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRF--------------- 511
            ....|..|:.|   |||..|..|..     |:.:::| .::|  :|..||               
  Fly   762 PLSFVRYGVQEAMTLARNDSTLSTT-----SKTSSRK-DKKN--SQASRFTIYKVHKASKKKREK 818

  Fly   512 ---RMETKAAKTLAIIVGMFIFCWCPFFTMYIIRPFC----QDCVDPL-LFSVLFWLGYCNSAVN 568
               :.|.||.|||||::|:|:|||.|||:..|:...|    :||...| .:.:..||||.||.||
  Fly   819 SSAKKERKATKTLAIVLGVFLFCWLPFFSCNIMDAMCAKFKKDCRPGLTAYMMTTWLGYINSFVN 883

  Fly   569 PMIYALFSKDFRFAFKRII 587
            |:||.:|:.:||.|||:|:
  Fly   884 PVIYTIFNPEFRKAFKKIM 902

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 51/124 (41%)
7tm_1 37..>181 CDD:278431 52/143 (36%)
Dop2RNP_001014758.2 7tmA_D2-like_dopamine_R 376..>565 CDD:320181 75/301 (25%)
TM helix 1 377..403 CDD:320181 8/21 (38%)
TM helix 2 410..436 CDD:320181 15/25 (60%)
TM helix 3 448..478 CDD:320181 16/29 (55%)
TM helix 4 490..513 CDD:320181 5/22 (23%)
TM helix 5 529..558 CDD:320181 15/29 (52%)
7tm_GPCRs <822..898 CDD:333717 35/75 (47%)
TM helix 6 825..850 CDD:320095 15/24 (63%)
TM helix 7 866..891 CDD:320095 12/24 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460611
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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