DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oamb and adra2db

DIOPT Version :9

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_919346.1 Gene:adra2db / 266755 ZFINID:ZDB-GENE-021010-5 Length:415 Species:Danio rerio


Alignment Length:576 Identity:154/576 - (26%)
Similarity:228/576 - (39%) Gaps:202/576 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ANLISLAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPFSATWEVF 83
            |:::.:.|:..|.::.|.||.||:.|||.|..||:..|.|:|:||.||:||...|:|||...||.
Zfish    32 ASVLIVLVVTVIILVTIVGNVLVVVAVFTSRALRAPQNLFLVSLAAADILVATLVIPFSLANEVM 96

  Fly    84 KVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAGIWVLS 148
            ..|..|..||..:||:||..||:||::|||||||||.:||:.|:|....:.::.|.:|..:||:|
Zfish    97 GYWYLGSTWCAFYLALDVLFCTSSIVHLCAISLDRYWSVTKAVSYNLKRTPRRIKIMITVVWVIS 161

  Fly   149 FFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPSPPHIGN 213
            ..|.||||:                                                        
Zfish   162 AVISFPPLL-------------------------------------------------------- 170

  Fly   214 GNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPPQNRPQT 278
                                                       .|...|::              
Zfish   171 -------------------------------------------MTKHDELE-------------- 178

  Fly   279 ISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFKTTKGSKGIG 343
                    |.|.|:..|:|.|.:.||:.|..:|:..|.||||.|.:....:   |....|.:   
Zfish   179 --------CLLNNETWYILSSCIVSFFAPGLIMILVYCRIYRVAKQRASTV---FVAKNGME--- 229

  Fly   344 SRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLHHHDKIKISVSY 408
             |...|..|..:.:|:...:..|.||:||.:                    |....|.|.:..|.
Zfish   230 -RQPSQSETCFVRKGKSEVESPSSHSSGSRE--------------------RKGELDDIDLEESS 273

  Fly   409 PSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVASSCYLQVGKGL 473
            .|:.                         |.|         |:..:.::..| |.||....|:  
Zfish   274 VSNR-------------------------HRN---------SRFAKSRKVEG-AQSCPKPNGR-- 301

  Fly   474 PELARRQSNTSEAGGSGHSRPANKKMGRRNIK-AQV--KRFRMETKAAKTLAIIVGMFIFCWCPF 535
              |:...|..||.    ...|..:::.....| ||:  |||..      .||:::|:|:.||.||
Zfish   302 --LSWACSRASEL----EQEPRARQLSLSKSKLAQMREKRFTF------VLAVVMGVFVLCWFPF 354

  Fly   536 FTMYIIRPFC-QDCVDP-LLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRIICR 589
            |..|.:...| :.|..| .||::.||:|||||:|||:||.:|::|||.|||:|:||
Zfish   355 FFTYSLHAICRKSCTIPDSLFNLFFWIGYCNSSVNPIIYTIFNRDFRKAFKKIMCR 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 58/124 (47%)
7tm_1 37..>181 CDD:278431 60/143 (42%)
adra2dbNP_919346.1 7tm_1 59..393 CDD:278431 132/530 (25%)
7tm_4 69..>226 CDD:304433 69/280 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 234..299 20/119 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
10.960

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