DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and adra2c

DIOPT Version :10

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_997522.1 Gene:adra2c / 266752 ZFINID:ZDB-GENE-021010-3 Length:432 Species:Danio rerio


Alignment Length:578 Identity:151/578 - (26%)
Similarity:243/578 - (42%) Gaps:189/578 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PANLISLA-VLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPFSATWE 81
            ||.:|.|| ::.|:.:..|.||.||:.||..|..|:...|.|:|:||.||:||...::|||...|
Zfish    32 PATIIGLAGLVSFLILFTIVGNVLVVIAVLTSRALKPPQNLFLVSLASADILVATLIIPFSLANE 96

  Fly    82 VFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAGIWV 146
            :...|.||::||.|:||:||..||:||::|||||||||.:||:.|.|....:.::.|.:|..:|:
Zfish    97 LMGYWFFGEVWCNIYLALDVLFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKGMIVVVWL 161

  Fly   147 LSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPSPPHI 211
            :|..|.||||:                                                      
Zfish   162 ISAVISFPPLI------------------------------------------------------ 172

  Fly   212 GNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPPQNRP 276
                                                              .||   .|...:.||
Zfish   173 --------------------------------------------------SMD---RNTVDERRP 184

  Fly   277 QTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFKTTKGSKG 341
            .         |:|.:...|:|||::|||:.|..:|:..|.|||:.|...||.:::..:...|..|
Zfish   185 M---------CQLNDHTWYILYSSIGSFFAPCVIMILVYIRIYQVAKTRTRNMSEKRRDPDGGSG 240

  Fly   342 IGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLHHHDKIKISV 406
                      |.|:.  .|.:::||...||...|      :|...:                   
Zfish   241 ----------TPRLE--NGLSREDSRRENGHCSS------SPGERK------------------- 268

  Fly   407 SYPSSEN-ISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVASSCYLQVG 470
              |:.:| .::|........:.::|.|.......:..:.|:::.|..:..::....:.|..|...
Zfish   269 --PAEDNPDADLEDSSSSDEKAKRSQNETAPSKKDRRSSRKNSSSSKHSSRKSRASSKSLDLFSS 331

  Fly   471 KGLPELARRQSNTSEAGGSGHSRPANKKMGRRNI-KAQVKRFRMETKAAKTLAIIVGMFIFCWCP 534
            :      |::.||               :.|:.| :|:.|||..      .||:::|:|:.||.|
Zfish   332 R------RKRRNT---------------ISRKKISQAREKRFTF------VLAVVMGVFVVCWFP 369

  Fly   535 FFTMYIIRPFCQD-CV--DPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRIICR 589
            ||..|.:...|:: |.  || ||...||:|||||::||:||.:|::|||.||::|:|:
Zfish   370 FFFSYSLYGICREPCAIPDP-LFKFFFWIGYCNSSLNPVIYTIFNQDFRRAFQKILCK 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tmA_Octopamine_R 21..583 CDD:320191 145/567 (26%)
TM helix 1 22..48 CDD:320191 11/26 (42%)
TM helix 2 55..81 CDD:320191 12/25 (48%)
TM helix 3 93..123 CDD:320191 19/29 (66%)
TM helix 4 135..158 CDD:320191 9/22 (41%)
TM helix 5 292..321 CDD:320191 13/28 (46%)
TM helix 6 512..542 CDD:320191 10/29 (34%)
TM helix 7 551..576 CDD:320191 14/24 (58%)
adra2cNP_997522.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
7tmA_alpha2C_AR 36..420 CDD:320446 145/566 (26%)
TM helix 1 37..63 CDD:320446 10/25 (40%)
TM helix 2 70..96 CDD:320446 12/25 (48%)
TM helix 3 108..138 CDD:320446 19/29 (66%)
TM helix 4 150..173 CDD:320446 9/126 (7%)
TM helix 5 191..220 CDD:320446 13/28 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 224..342 25/177 (14%)
TM helix 6 347..377 CDD:320446 14/35 (40%)
TM helix 7 388..413 CDD:320446 15/25 (60%)
Blue background indicates that the domain is not in the aligned region.

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