DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and Olfr787

DIOPT Version :9

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001011822.1 Gene:Olfr787 / 258069 MGIID:3030621 Length:312 Species:Mus musculus


Alignment Length:142 Identity:38/142 - (26%)
Similarity:66/142 - (46%) Gaps:1/142 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 EPANLISLAVLEFI-NVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPFSATW 80
            :|...:.:.:|.|| .:|.:.||..:|......::|::...||:.|.:..:::.....:|.....
Mouse    18 DPEVQVVIFILLFIAYILSVTGNLTIIILTLLDSQLKTPMYFFLQNFSFLEIIFTSVSIPRFLES 82

  Fly    81 EVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAGIW 145
            .:.||.......|...|...:.|..:....|.|:|.|||||:.:|:.|..||:.|....|:...|
Mouse    83 IITKVKTISYNNCLAQLYFFISMGVSEFFLLTAMSYDRYVAICKPLHYTLIMNQKVCTLLVLASW 147

  Fly   146 VLSFFICFPPLV 157
            :..|...||||:
Mouse   148 LAGFLTIFPPLM 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 32/125 (26%)
7tm_1 37..>181 CDD:278431 33/121 (27%)
Olfr787NP_001011822.1 7tmA_OR6C-like 23..292 CDD:320578 37/137 (27%)
TM helix 1 24..50 CDD:320578 7/25 (28%)
TM helix 2 57..83 CDD:320578 4/25 (16%)
TM helix 3 95..125 CDD:320578 11/29 (38%)
TM helix 4 138..159 CDD:320578 6/20 (30%)
TM helix 5 193..223 CDD:320578
TM helix 6 230..260 CDD:320578
TM helix 7 267..292 CDD:320578
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7831
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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