DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and Drd5

DIOPT Version :10

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_036900.2 Gene:Drd5 / 25195 RGDID:2523 Length:475 Species:Rattus norvegicus


Alignment Length:651 Identity:155/651 - (23%)
Similarity:230/651 - (35%) Gaps:277/651 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PANLISLAVLEFINVLVIGGNCLVIAAVFCSNKLRS-VTNFFIVNLAVADLLVGLAVLPFSATWE 81
            ||.:::..:|..:.|..:.||.||.||:..|..||: :||.|||:|||:||.|.|.|:|:.|..|
  Rat    36 PAQVVTAGLLTLLIVWTLLGNVLVCAAIVRSRHLRAKMTNIFIVSLAVSDLFVALLVMPWKAVAE 100

  Fly    82 VFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAGIWV 146
            |...|.|| .:|.||:|.|:...||||||||.||:|||.|::||..|...|:.:.|..::...|.
  Rat   101 VAGYWPFG-TFCDIWVAFDIMCSTASILNLCIISVDRYWAISRPFRYERKMTQRVALVMVGLAWT 164

  Fly   147 LSFFICFPPL-VGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPSPPH 210
            ||..|.|.|: :.|...||                     ...||.||                 
  Rat   165 LSILISFIPVQLNWHRDKA---------------------GSQGQEGL----------------- 191

  Fly   211 IGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPPQNR 275
            :.||   .|::.|: .::|..|                                           
  Rat   192 LSNG---TPWEEGW-ELEGRTE------------------------------------------- 209

  Fly   276 PQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFKTTKGSK 340
                      .|:.:.:|.|.:.|:|.|||||:.:|:..|.||||.|....|.|           
  Rat   210 ----------NCDSSLNRTYAISSSLISFYIPVAIMIVTYTRIYRIAQVQIRRI----------- 253

  Fly   341 GIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLHHHDKIKIS 405
               |..|           |.:....|..|.|:.:        |.|                    
  Rat   254 ---SSLE-----------RAAEHAQSCRSRGAYE--------PDP-------------------- 276

  Fly   406 VSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVASSCYLQVG 470
                                                                             
  Rat   277 ----------------------------------------------------------------- 276

  Fly   471 KGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETKAAKTLAIIVGMFIFCWCPF 535
                                            :::|.:|:   |||..|||::|:|:|:.||.||
  Rat   277 --------------------------------SLRASIKK---ETKVFKTLSMIMGVFVCCWLPF 306

  Fly   536 FTMYIIRPFCQD-----------CVDPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRII-C 588
            |.:..:.|||..           ||....|.:..|.|:.||::||:||| |:.|||..|.::: |
  Rat   307 FILNCMVPFCSSGDAEGPKTGFPCVSETTFDIFVWFGWANSSLNPIIYA-FNADFRKVFAQLLGC 370

  Fly   589 RCFCSR---QSVSLKSSRRGSDMSAI---RIRARTPSITPSAAA---HSFGDESEL----HHSEM 640
            ..||.|   |:|::.:.....:...:   .|.|....:.|:|.:   ...|:|.|.    |.|::
  Rat   371 SHFCFRTPVQTVNISNELISYNQDTVFHKEIAAAYVHMIPNAVSSGDREVGEEEEEGPFDHMSQI 435

  Fly   641 S 641
            |
  Rat   436 S 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tmA_Octopamine_R 21..583 CDD:320191 136/574 (24%)
TM helix 1 22..48 CDD:320191 8/25 (32%)
TM helix 2 55..81 CDD:320191 15/25 (60%)
TM helix 3 93..123 CDD:320191 19/29 (66%)
TM helix 4 135..158 CDD:320191 7/23 (30%)
TM helix 5 292..321 CDD:320191 14/28 (50%)
TM helix 6 512..542 CDD:320191 14/29 (48%)
TM helix 7 551..576 CDD:320191 10/24 (42%)
Drd5NP_036900.2 7tm_GPCRs 39..364 CDD:475119 136/574 (24%)
TM helix 1 41..65 CDD:410628 8/23 (35%)
TM helix 2 75..97 CDD:410628 13/21 (62%)
TM helix 3 112..134 CDD:410628 13/21 (62%)
TM helix 4 157..173 CDD:410628 5/15 (33%)
TM helix 5 217..240 CDD:410628 10/22 (45%)
TM helix 6 289..311 CDD:410628 11/21 (52%)
TM helix 7 333..358 CDD:410628 11/25 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 415..443 6/22 (27%)

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