DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oamb and Adra2c

DIOPT Version :9

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_612515.2 Gene:Adra2c / 24175 RGDID:2058 Length:458 Species:Rattus norvegicus


Alignment Length:594 Identity:159/594 - (26%)
Similarity:234/594 - (39%) Gaps:201/594 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 WTEPANLIS-------LAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLA 72
            |..|....|       .||:.|:.|..:.||.||:.||..|..||:..|.|:|:||.||:||...
  Rat    39 WGPPPGQYSAGAVAGLAAVVGFLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATL 103

  Fly    73 VLPFSATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKA 137
            |:|||...|:...|.||.:||.::||:||..||:||::|||||||||.:||:.|.|....:.::.
  Rat   104 VMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRV 168

  Fly   138 KSLIAGIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEA 202
            |:.|..:|::|..|.|||||.                   :|...                    
  Rat   169 KATIVAVWLISAVISFPPLVS-------------------FYRRP-------------------- 194

  Fly   203 SLPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDL 267
                      :|.||                                                  
  Rat   195 ----------DGAAY-------------------------------------------------- 199

  Fly   268 LNAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQG 332
                    ||         |.|.::..|:|.|.:|||:.|..:|...|.||||.|...||.::: 
  Rat   200 --------PQ---------CGLNDETWYILSSCIGSFFAPCLIMGLVYARIYRVAKLRTRTLSE- 246

  Fly   333 FKTTKGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLH 397
               .:|..|                           .:|::.:|...||..:.|.         .
  Rat   247 ---KRGPAG---------------------------PDGASPTTENGLGKAAGEN---------G 272

  Fly   398 HHDKIKISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVA 462
            |....:..|. |...:.:          |||:...||    ..|...||..|...       |.|
  Rat   273 HCAPPRTEVE-PDESSAA----------ERRRRRGAL----RRGGRRREGAEGDT-------GSA 315

  Fly   463 SSCYLQVGKGL-PELARRQSNTSEAGGSGHSRPANKKM-----GRRNIKAQVKRFRM----ETKA 517
            ..    .|.|| .|...|.::.|...|...||.:::.:     .||..::.|.|.::    |.:.
  Rat   316 DG----PGPGLAAEQGARTASRSPGPGGRLSRASSRSVEFFLSRRRRARSSVCRRKVAQAREKRF 376

  Fly   518 AKTLAIIVGMFIFCWCPFFTMYIIRPFCQD-CVDP-LLFSVLFWLGYCNSAVNPMIYALFSKDFR 580
            ...||:::|:|:.||.|||..|.:...|:: |..| .||...||:|||||::||:||.:|::|||
  Rat   377 TFVLAVVMGVFVLCWFPFFFSYSLYGICREACQLPEPLFKFFFWIGYCNSSLNPVIYTVFNQDFR 441

  Fly   581 FAFKRIICR 589
            .:||.|:.|
  Rat   442 RSFKHILFR 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 56/124 (45%)
7tm_1 37..>181 CDD:278431 60/143 (42%)
Adra2cNP_612515.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 245..343 28/163 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
32.870

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