DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oamb and Adra2b

DIOPT Version :9

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_612514.2 Gene:Adra2b / 24174 RGDID:2057 Length:453 Species:Rattus norvegicus


Alignment Length:617 Identity:161/617 - (26%)
Similarity:238/617 - (38%) Gaps:224/617 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 EPANLISLA----VLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPFS 77
            ||.::.:.|    .:.|:.:..|.||.|||.||..|..||:..|.|:|:||.||:||...::|||
  Rat    10 EPYSVQATAAIASAITFLILFTIFGNALVILAVLTSRSLRAPQNLFLVSLAAADILVATLIIPFS 74

  Fly    78 ATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIA 142
            ...|:...|.|...||.::||:||..||:||::|||||||||.||:|.:.|.|..:.::.|.:|.
  Rat    75 LANELLGYWYFWRAWCEVYLALDVLFCTSSIVHLCAISLDRYWAVSRALEYNSKRTPRRIKCIIL 139

  Fly   143 GIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPS 207
            .:|:::..|..|||:...||:       |:                                   
  Rat   140 TVWLIAAVISLPPLIYKGDQR-------PE----------------------------------- 162

  Fly   208 PPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPP 272
                                                                            |
  Rat   163 ----------------------------------------------------------------P 163

  Fly   273 QNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFKTTK 337
            :..||         |||..:..|:|.|::|||:.|..:|:..|.|||..|.|:            
  Rat   164 RGLPQ---------CELNQEAWYILASSIGSFFAPCLIMILVYLRIYVIAKRS------------ 207

  Fly   338 GSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLHHHDKI 402
            ..:|:|::           ||.|..:        |.:......|.|:..              |:
  Rat   208 HCRGLGAK-----------RGSGEGE--------SKKPQPVAGGVPTSA--------------KV 239

  Fly   403 KISVSYPSSENISELAGHGDVGHERRQ---------------------SGNALFAVHYNGTNGR- 445
            ...||..||  :.|..||.....|:.:                     ||..    ...||:|. 
  Rat   240 PTLVSPLSS--VGEANGHPKPPREKEEGETPEDPEARALPPTWSALPRSGQG----QKKGTSGAT 298

  Fly   446 -----ESTESQLYRQQQQ---HGVASSCYLQVGKGLPELARRQSNTSEAGGSGHSRPANKKMG-- 500
                 |..|.::...:.|   ...||.|.       |.|.:.|::...|...|... ..|.:|  
  Rat   299 AEEGDEEDEEEVEECEPQTLPASPASVCN-------PPLQQPQTSRVLATLRGQVL-LGKNVGVA 355

  Fly   501 ------RRNIKAQVKRFRMETKAAKTLAIIVGMFIFCWCPFFTMYIIRPFC-QDCVDPL-LFSVL 557
                  ||...::.|||..      .||:::|:|:.||.|||..|.:...| |.|..|. ||...
  Rat   356 SGQWWRRRTQLSREKRFTF------VLAVVIGVFVVCWFPFFFSYSLGAICPQHCKVPHGLFQFF 414

  Fly   558 FWLGYCNSAVNPMIYALFSKDFRFAFKRIICR 589
            ||:|||||::||:||.:|::|||.||:||:||
  Rat   415 FWIGYCNSSLNPVIYTVFNQDFRRAFRRILCR 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 55/124 (44%)
7tm_1 37..>181 CDD:278431 59/143 (41%)
Adra2bNP_612514.2 7tm_4 26..>157 CDD:304433 58/130 (45%)
7tm_1 34..429 CDD:278431 144/574 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..331 28/163 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
32.870

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