DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oamb and Htr7

DIOPT Version :9

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001334371.1 Gene:Htr7 / 15566 MGIID:99841 Length:470 Species:Mus musculus


Alignment Length:601 Identity:147/601 - (24%)
Similarity:209/601 - (34%) Gaps:271/601 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 AVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPF-SATWEVFKVWIF 88
            ::|..|.:|.|.|||||:.:|....|||..:|:.||:||:|||.|.:||:|| |.|..:...|||
Mouse    89 SILTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAVMPFVSVTDLIGGKWIF 153

  Fly    89 GDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAGIWVLSFFICF 153
            |..:|.:::|:||..|||||:.||.||:|||:.:|||:|||...:.|....:|..:|:||..|..
Mouse   154 GHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVWLLSASITL 218

  Fly   154 PPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPSPPHIGNGNAYN 218
            |||.||                                                        |.|
Mouse   219 PPLFGW--------------------------------------------------------AQN 227

  Fly   219 PYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPPQNRPQTISGSC 283
            ..|                 |..                                          
Mouse   228 VND-----------------DKV------------------------------------------ 233

  Fly   284 PWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQ--GFKTTKGSKGIGSRF 346
               |.::.|.||.:||...:|||||.||||.|::||:|| |.:.|.::  ||...          
Mouse   234 ---CLISQDFGYTIYSTAVAFYIPMSVMLFMYYQIYKAA-RKSAAKHKFSGFPRV---------- 284

  Fly   347 EEQRLTLRIHRGRGSNQQDSMHS-NGSTQSTTTTLGTPSPERLSKYATRRLHHHDKIKISVSYPS 410
                            |.:|:.| ||                             .:|:......
Mouse   285 ----------------QPESVISLNG-----------------------------VVKLQKEVEE 304

  Fly   411 SENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVASSCYLQVGKGLPE 475
            ..|:|.|     :.|||:                                               
Mouse   305 CANLSRL-----LKHERK----------------------------------------------- 317

  Fly   476 LARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETKAAKTLAIIVGMFIFCWCPFFTMYI 540
                                           .:..|:.|.|||.||.||||.|..||.|||.:..
Mouse   318 -------------------------------NISIFKREQKAATTLGIIVGAFTVCWLPFFLLST 351

  Fly   541 IRPF-----CQDCVDPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRIICRCFCSRQSVSLK 600
            .|||     | .|:...:.....||||.||.:||.|||.|::|.|..::.::   .|..::::.|
Mouse   352 ARPFICGTSC-SCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRTTYRSLL---QCQYRNINRK 412

  Fly   601 SSRRGSDMSAIRIRAR 616
            .|..|.. .|:::..|
Mouse   413 LSAAGMH-EALKLAER 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 59/125 (47%)
7tm_1 37..>181 CDD:278431 61/144 (42%)
Htr7NP_001334371.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24247
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.