DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and ADRB1

DIOPT Version :10

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_000675.1 Gene:ADRB1 / 153 HGNCID:285 Length:477 Species:Homo sapiens


Alignment Length:668 Identity:155/668 - (23%)
Similarity:237/668 - (35%) Gaps:254/668 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SVKWTEPANLISLAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPF 76
            |.:||....|:    :..|.:|::.||.|||.|:..:.:|:::||.||::||.|||::||.|:||
Human    54 SQQWTAGMGLL----MALIVLLIVAGNVLVIVAIAKTPRLQTLTNLFIMSLASADLVMGLLVVPF 114

  Fly    77 SATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLI 141
            .||..|:..|.:|..:|.:|.:|||...||||..||.|:||||:|:|.|..|.|:::..:|:.|:
Human   115 GATIVVWGRWEYGSFFCELWTSVDVLCVTASIETLCVIALDRYLAITSPFRYQSLLTRARARGLV 179

  Fly   142 AGIWVLSFFICFPPLV--GWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASL 204
            ..:|.:|..:.|.|::  .|:                       :.|::.:              
Human   180 CTVWAISALVSFLPILMHWWR-----------------------AESDEAR-------------- 207

  Fly   205 PPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLN 269
                      ..||  ||                                               
Human   208 ----------RCYN--DP----------------------------------------------- 213

  Fly   270 APPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFK 334
                        .|   |:...:|.|.:.|::.|||:|:.:|.|.|.|::|.|.:..:.|:..  
Human   214 ------------KC---CDFVTNRAYAIASSVVSFYVPLCIMAFVYLRVFREAQKQVKKIDSC-- 261

  Fly   335 TTKGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLHHH 399
                         |:|..       |...:....|.....:.....|.|.|...:  ||..|   
Human   262 -------------ERRFL-------GGPARPPSPSPSPVPAPAPPPGPPRPAAAA--ATAPL--- 301

  Fly   400 DKIKISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVASS 464
                                                      .|||                   
Human   302 ------------------------------------------ANGR------------------- 305

  Fly   465 CYLQVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETKAAKTLAIIVGMFI 529
                                    :|..||:.....|            |.||.|||.||:|:|.
Human   306 ------------------------AGKRRPSRLVALR------------EQKALKTLGIIMGVFT 334

  Fly   530 FCWCPFFTMYIIRPFCQDCVDPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRIICRCFCSR 594
            .||.|||...:::.|.::.|...||....||||.|||.||:||.. |.|||.||:.::|   |:|
Human   335 LCWLPFFLANVVKAFHRELVPDRLFVFFNWLGYANSAFNPIIYCR-SPDFRKAFQGLLC---CAR 395

  Fly   595 QSVSLKSSRRGSDMSAIRIRARTPSITPSAAAHSFGDESELHHSEMSNDPRXRSFGPSSSSQSSL 659
            ::...:.:..|....|....|| |...||..|.|..|:.::    :...|. |...|.:......
Human   396 RAARRRHATHGDRPRASGCLAR-PGPPPSPGAASDDDDDDV----VGATPPARLLEPWAGCNGGA 455

  Fly   660 GGLRKTSLKVPVYEICHP 677
            .....:||..|    |.|
Human   456 AADSDSSLDEP----CRP 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tmA_Octopamine_R 21..583 CDD:320191 129/563 (23%)
TM helix 1 22..48 CDD:320191 8/25 (32%)
TM helix 2 55..81 CDD:320191 16/25 (64%)
TM helix 3 93..123 CDD:320191 17/29 (59%)
TM helix 4 135..158 CDD:320191 6/24 (25%)
TM helix 5 292..321 CDD:320191 11/28 (39%)
TM helix 6 512..542 CDD:320191 15/29 (52%)
TM helix 7 551..576 CDD:320191 13/24 (54%)
ADRB1NP_000675.1 7tmA_Beta1_AR 59..387 CDD:320624 129/567 (23%)
TM helix 1 60..86 CDD:320624 9/29 (31%)
TM helix 2 93..120 CDD:320624 16/26 (62%)
TM helix 3 131..161 CDD:320624 17/29 (59%)
TM helix 4 175..193 CDD:320624 5/17 (29%)
TM helix 5 221..253 CDD:320624 13/31 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 269..307 10/127 (8%)
TM helix 6 317..347 CDD:320624 16/41 (39%)
TM helix 7 356..381 CDD:320624 13/25 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 403..477 18/76 (24%)
PDZ-Binding 474..477
Blue background indicates that the domain is not in the aligned region.

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