DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and ADRA2C

DIOPT Version :9

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_000674.2 Gene:ADRA2C / 152 HGNCID:283 Length:462 Species:Homo sapiens


Alignment Length:611 Identity:159/611 - (26%)
Similarity:232/611 - (37%) Gaps:231/611 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 WTEPANLIS-------LAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLA 72
            |..|....|       .||:.|:.|..:.||.||:.||..|..||:..|.|:|:||.||:||...
Human    39 WGPPRGQYSAGAVAGLAAVVGFLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATL 103

  Fly    73 VLPFSATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKA 137
            |:|||...|:...|.||.:||.::||:||..||:||::|||||||||.:||:.|.|....:.::.
Human   104 VMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRV 168

  Fly   138 KSLIAGIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEA 202
            |:.|..:|::|..|.|||||                                             
Human   169 KATIVAVWLISAVISFPPLV--------------------------------------------- 188

  Fly   203 SLPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDL 267
            ||...|    :|.||                                                  
Human   189 SLYRQP----DGAAY-------------------------------------------------- 199

  Fly   268 LNAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQG 332
                    ||         |.|.::..|:|.|.:|||:.|..:|...|.||||.|...||.::  
Human   200 --------PQ---------CGLNDETWYILSSCIGSFFAPCLIMGLVYARIYRVAKLRTRTLS-- 245

  Fly   333 FKTTKGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLH 397
                           |:|..:                              .|:..|        
Human   246 ---------------EKRAPV------------------------------GPDGAS-------- 257

  Fly   398 HHDKIKISVSYPSSEN-ISELAGHGDVGH-----------------ERRQSGNALFAVHYNGTNG 444
                       |::|| :...||.|:.||                 |||:...||      ...|
Human   258 -----------PTTENGLGAAAGAGENGHCAPPPADVEPDESSAAAERRRRRGAL------RRGG 305

  Fly   445 RESTESQLYRQQQQHGVASSCYLQVGKGLPELARRQSNTSEAGGSGHSRPANKKM-----GRRNI 504
            |.       |...:.|...:.....|.|..|.....::.|...|...||.:::.:     .||..
Human   306 RR-------RAGAEGGAGGADGQGAGPGAAESGALTASRSPGPGGRLSRASSRSVEFFLSRRRRA 363

  Fly   505 KAQVKRFRM----ETKAAKTLAIIVGMFIFCWCPFFTMYIIRPFCQD-CVDP-LLFSVLFWLGYC 563
            ::.|.|.::    |.:....||:::|:|:.||.|||..|.:...|:: |..| .||...||:|||
Human   364 RSSVCRRKVAQAREKRFTFVLAVVMGVFVLCWFPFFFSYSLYGICREACQVPGPLFKFFFWIGYC 428

  Fly   564 NSAVNPMIYALFSKDFRFAFKRIICR 589
            ||::||:||.:|::|||.:||.|:.|
Human   429 NSSLNPVIYTVFNQDFRRSFKHILFR 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 56/124 (45%)
7tm_1 37..>181 CDD:278431 59/143 (41%)
ADRA2CNP_000674.2 7tmA_alpha2C_AR 60..448 CDD:320446 150/582 (26%)
TM helix 2 86..112 CDD:320446 13/25 (52%)
TM helix 3 124..154 CDD:320446 18/29 (62%)
TM helix 4 166..189 CDD:320446 10/67 (15%)
TM helix 5 207..236 CDD:320446 12/28 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 246..347 26/162 (16%)
TM helix 6 375..405 CDD:320446 11/29 (38%)
TM helix 7 416..441 CDD:320446 13/24 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
21.870

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