DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and Octbeta2R

DIOPT Version :10

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_003436280.1 Gene:Octbeta2R / 1273081 VectorBaseID:AGAMI1_002356 Length:526 Species:Anopheles gambiae


Alignment Length:638 Identity:163/638 - (25%)
Similarity:239/638 - (37%) Gaps:251/638 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KWTEPANLI-SLAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPFS 77
            :|.:...|: ..:::.||.|..|.||.|||.:|....|||.:||:|:|:||:||::|.:..:.|:
Mosquito   125 EWIDVVLLVLKASIMMFIIVAAIFGNLLVIISVKRHRKLRVITNYFVVSLAMADIMVAMMAMTFN 189

  Fly    78 ATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIA 142
            .:.::...|.||...|.:|.::||:..|||||:||.||:|||.|:.:|:.||..|:.:....::.
Mosquito   190 FSVQITGSWKFGSFMCDVWNSLDVYFSTASILHLCCISVDRYYAIVKPLKYPISMTKRVVAIMLL 254

  Fly   143 GIWVLSFFICFPPL-VGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPP 206
            ..|:....:.|.|: .||                   |||.....|        :.|        
Mosquito   255 NTWISPALLSFVPIFAGW-------------------YTTEKHKQE--------VLD-------- 284

  Fly   207 SPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAP 271
                       ||                   ||.                       |.::|.|
Mosquito   285 -----------NP-------------------DSC-----------------------LFIVNKP 296

  Fly   272 PQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFKTT 336
                                   |.:.|:..||:||..:|:|.|::|:|.|.|            
Mosquito   297 -----------------------YAVISSSISFFIPCTIMVFTYFQIFREANR------------ 326

  Fly   337 KGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLHHHDK 401
                      :|::|.||                   |.|...                :|.|  
Mosquito   327 ----------QEKQLALR-------------------QGTAML----------------MHQH-- 344

  Fly   402 IKISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVASSCY 466
                       |.....|.|..|               .||||           :...|..||..
Mosquito   345 -----------NTGGGVGGGGSG---------------GGTNG-----------EALSGSGSSKT 372

  Fly   467 LQVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETKAAKTLAIIVGMFIFC 531
            |.    |.|:...|:.|.:               |..||  :||   |.|||:||.||:|.||.|
Mosquito   373 LT----LHEVDAEQTPTKD---------------RHLIK--MKR---EHKAARTLGIIMGTFILC 413

  Fly   532 WCPFFTMYIIRPFCQDCVDP-LLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRIICRCFCSRQ 595
            |.|||..|||...|..|.:| ::.:::||:||.||.:||:|||.|::|||.||:..:...||:..
Mosquito   414 WLPFFLWYIITSLCDRCPNPDIVVALVFWIGYFNSTLNPLIYAYFNRDFREAFRNTLDCMFCAWW 478

  Fly   596 SVSLKSSRRGSDMSAIRIRARTPSITPSAAAHSFGDESELH--------HSEM 640
                   ||  :.|.:.|..|..|:.....|.|...||.|.        |||:
Mosquito   479 -------RR--ETSPLDINVRRASLRYDCRAKSVYSESYLRPSSQTDRFHSEI 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tmA_Octopamine_R 21..583 CDD:320191 144/564 (26%)
TM helix 1 22..48 CDD:320191 10/26 (38%)
TM helix 2 55..81 CDD:320191 10/25 (40%)
TM helix 3 93..123 CDD:320191 17/29 (59%)
TM helix 4 135..158 CDD:320191 3/23 (13%)
TM helix 5 292..321 CDD:320191 10/28 (36%)
TM helix 6 512..542 CDD:320191 18/29 (62%)
TM helix 7 551..576 CDD:320191 12/25 (48%)
Octbeta2RXP_003436280.1 7tmA_DmOct-betaAR-like 134..466 CDD:320194 143/562 (25%)
TM helix 1 134..160 CDD:320194 10/25 (40%)
TM helix 2 167..193 CDD:320194 10/25 (40%)
TM helix 3 205..235 CDD:320194 17/29 (59%)
TM helix 4 247..270 CDD:320194 3/22 (14%)
TM helix 5 294..323 CDD:320194 12/51 (24%)
TM helix 6 394..424 CDD:320194 20/32 (63%)
TM helix 7 434..459 CDD:320194 11/24 (46%)

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