DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and Adra2a

DIOPT Version :9

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_031443.4 Gene:Adra2a / 11551 MGIID:87934 Length:465 Species:Mus musculus


Alignment Length:584 Identity:159/584 - (27%)
Similarity:234/584 - (40%) Gaps:191/584 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LISLAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPFSATWEVFKV 85
            |:.||.|  :.:..:.||.|||.|||.|..|::..|.|:|:||.||:||...|:|||...||...
Mouse    51 LVCLAGL--LMLFTVFGNVLVIIAVFTSRALKAPQNLFLVSLASADILVATLVIPFSLANEVMGY 113

  Fly    86 WIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAGIWVLSFF 150
            |.||.:||.|:||:||..||:||::|||||||||.::|:.:.|....:.::.|::|..:||:|..
Mouse   114 WYFGKVWCEIYLALDVLFCTSSIVHLCAISLDRYWSITQAIEYNLKRTPRRIKAIIVTVWVISAV 178

  Fly   151 ICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPSPPHIGNGN 215
            |.||||:                                     ||:.:|.            |.
Mouse   179 ISFPPLI-------------------------------------SIEKKGA------------GG 194

  Fly   216 AYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPPQNRPQTIS 280
            ...|.:|                                                          
Mouse   195 GQQPAEP---------------------------------------------------------- 201

  Fly   281 GSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRA--INQGFKTTKGSKGIG 343
                 .|::.:.:.||:.|::|||:.|..:|:..|.|||:.|.|.||.  ..:|........|..
Mouse   202 -----SCKINDQKWYVISSSIGSFFAPCLIMILVYVRIYQIAKRRTRVPPSRRGPDACSAPPGGA 261

  Fly   344 SRFEEQRLTLRIHRGRGSNQQDS----MHSNGSTQSTTTTLGTPSPERLSKYATRRLHHHDKIKI 404
            .|   :...|...||.|....::    ...||:.       |.|:|                   
Mouse   262 DR---RPNGLGPERGAGPTGAEAEPLPTQLNGAP-------GEPAP------------------- 297

  Fly   405 SVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVASSCYLQV 469
              :.|...:..:|.......|..|..|                 ..:..|..:..|...:..::.
Mouse   298 --AGPRDGDALDLEESSSSEHAERPPG-----------------PRRPDRGPRAKGKTRASQVKP 343

  Fly   470 GKGLPELARRQSNTSEAG--GSGHSR------PANKKMGRRNIKAQVKRFRMETKAAKTLAIIVG 526
            |..||   ||....:..|  ||||..      .|::..||:|   :.|||..      .||:::|
Mouse   344 GDSLP---RRGPGAAGPGASGSGHGEERGGGAKASRWRGRQN---REKRFTF------VLAVVIG 396

  Fly   527 MFIFCWCPFFTMY-IIRPFCQDCVDPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRIICR 589
            :|:.||.|||..| :|...|.  |...||:..||.|||||::||:||.:|:.|||.|||:|:||
Mouse   397 VFVVCWFPFFFTYTLIAVGCP--VPSQLFNFFFWFGYCNSSLNPVIYTIFNHDFRRAFKKILCR 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 56/124 (45%)
7tm_1 37..>181 CDD:278431 60/143 (42%)
Adra2aNP_031443.4 7tmA_alpha2A_AR 49..452 CDD:320445 153/576 (27%)
TM helix 1 51..75 CDD:320445 11/25 (44%)
TM helix 2 84..106 CDD:320445 12/21 (57%)
TM helix 3 122..144 CDD:320445 13/21 (62%)
TM helix 4 167..183 CDD:320445 6/15 (40%)
TM helix 5 209..232 CDD:320445 8/22 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..378 32/186 (17%)
TM helix 6 388..410 CDD:320445 9/27 (33%)
TM helix 7 420..445 CDD:320445 13/24 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

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