Protein Alignment Oamb and htr1f

DIOPT Version :10

• Sequence 1: NP_001262774.1
• Gene: Oamb / 43982
• FlyBaseID: FBgn0024944
• Length: 751
• Species: Drosophila melanogaster
• Sequence 2: XP_002931817.1
• Gene: htr1f / 100494586
• XenbaseID: XB-GENE-1010473
• Length: 360
• Species: Xenopus tropicalis
• Alignment Length: 595
• Identity: 144/595 - (24%)
• Similarity: 216/595 - (36%)
• Gaps: 249/595 - (41%)

  Fly     1 MNETEC--EDLIKSVKWTEPANLISLAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLA 63
            :.:..|  |.|.|.:   .|..|||| .|..:.::....|.|||||:..:.||....|:.|.:||
 Frog     6 LTDYNCTSEHLQKGI---TPKILISL-TLSILTLMTTAINSLVIAAIIVTRKLHHPANYLICSLA 66

  Fly    64 VADLLVGLAVLPFSATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTY 128
            |.|.||.:.|:|||..:.:.:.||.|...|.|||:||:..||.|||:|.||:||||.|:|..|.|
 Frog    67 VTDFLVAVLVMPFSIMYIMKETWIMGQAICDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEY 131

  Fly   129 PSIMSTKKAKSLIAGIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGL 193
            ....:.|.|..:||.:|::|.||..|||. |:.|
 Frog   132 ARKRTPKHAAFMIAVVWIISIFISMPPLF-WRHQ------------------------------- 164

  Fly   194 DSIKDQGEASLPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSST 258
                                  |.|..|
 Frog   165 ----------------------ALNKED------------------------------------- 170

  Fly   259 TETEMDLDLLNAPPQNRPQTISGSCPWKCELTNDR-GYVLYSALGSFYIPMFVMLFFYWRIYRAA 322
                                       :|.:.:|. .:.:||..|:||||:.::|..|::||:||
 Frog   171 ---------------------------ECIIKHDHIVFTIYSTFGAFYIPLALILILYYKIYKAA 208

  Fly   323 VRTTRAINQGFKTTKGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPER 387
                       ||....:.: ||.|.::                   ||......||....:.:.
 Frog   209 -----------KTLYHKRSV-SRVEREQ-------------------NGQVLLDATTTLCIAEKS 242

  Fly   388 LSKYATRRLHHHDKIKISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGR-ESTESQ 451
            .|.::|    ..|||.|:|                                   .|.| |..:.:
 Frog   243 FSDHST----DFDKIHITV-----------------------------------RNARVEMKQEK 268

  Fly   452 LYRQQQQHGVASSCYLQVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETK 516
            .||:|:   ::|:                                                .|.|
 Frog   269 AYRKQK---ISST------------------------------------------------RERK 282

  Fly   517 AAKTLAIIVGMFIFCWCPFFTMYIIRPFCQDC-VDPLLFSVLFWLGYCNSAVNPMIYALFSKDFR 580
            ||.||.:|:|.|:.||.|||...:|...|:.| :...:.:.|.||||.||.:||:||.:|::||:
 Frog   283 AATTLGLILGAFVICWLPFFVKEVIVNICESCYISDDMSNFLTWLGYLNSLINPLIYTIFNEDFK 347

  Fly   581 FAFKRIICRC 590
            .||:::: ||
 Frog   348 KAFQKLM-RC 356

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Oamb	NP_001262774.1	7tmA_Octopamine_R	21..583	CDD:320191	135/564 (24%)
		TM helix 1	22..48	CDD:320191	10/25 (40%)
		TM helix 2	55..81	CDD:320191	12/25 (48%)
		TM helix 3	93..123	CDD:320191	19/29 (66%)
		TM helix 4	135..158	CDD:320191	11/22 (50%)
		TM helix 5	292..321	CDD:320191	12/29 (41%)
		TM helix 6	512..542	CDD:320191	14/29 (48%)
		TM helix 7	551..576	CDD:320191	11/24 (46%)
htr1f	XP_002931817.1	7tmA_5-HT1F	24..351	CDD:320456	136/566 (24%)
		TM helix 1	25..51	CDD:320456	11/26 (42%)
		TM helix 2	58..84	CDD:320456	12/25 (48%)
		TM helix 3	96..126	CDD:320456	19/29 (66%)
		TM helix 4	138..160	CDD:320456	10/21 (48%)
		TM helix 5	178..207	CDD:320456	11/28 (39%)
		TM helix 6	278..308	CDD:320456	14/77 (18%)
		TM helix 7	318..343	CDD:320456	11/24 (46%)