DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and LOC100490372

DIOPT Version :10

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_002937327.2 Gene:LOC100490372 / 100490372 XenbaseID:XB-GENE-29080159 Length:405 Species:Xenopus tropicalis


Alignment Length:600 Identity:126/600 - (21%)
Similarity:200/600 - (33%) Gaps:292/600 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 AVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPFSATWEVFKVWIFG 89
            ::|..|:::...||.:|........:||:||..||::||:|||||...|:|||..:||..:|:||
 Frog    60 SLLTVIDLITFLGNAVVFICPVVEKRLRTVTYMFIMSLAMADLLVACLVMPFSIIYEVTGMWLFG 124

  Fly    90 DLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAGIWVLSFFICFP 154
            ..:|::|::.||..|||||:.||.||||||.:|..|..|...||.::...:...|||.|..|.|.
 Frog   125 KQFCKVWISFDVMFCTASIVTLCFISLDRYCSVVTPYHYSKRMSRRRCIIMTVTIWVYSSLISFL 189

  Fly   155 PLV-GWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPSPPHIGNGNAYN 218
            |:: ||.:        .|                    |:|:  |.|:                 
 Frog   190 PVMQGWNE--------IP--------------------GVDT--DNGK----------------- 207

  Fly   219 PYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPPQNRPQTISGSC 283
                                                                             
 Frog   208 ----------------------------------------------------------------- 207

  Fly   284 PWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAA-VRTTRAINQGFKTTKGSKGIGSRFE 347
              :|....:..:.:.::..:||||..:|...|:.||||: ::.||.::|                
 Frog   208 --QCIFVTNWTFAIVASSLAFYIPFIIMCSMYFFIYRASRLKATRIVSQ---------------- 254

  Fly   348 EQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLHHHDKIKISVSYPSSE 412
                                                         |..||:|         |:| 
 Frog   255 ---------------------------------------------TLDLHYH---------PNS- 264

  Fly   413 NISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVASSCYLQVGKGLPELA 477
                                                                             
 Frog   265 ----------------------------------------------------------------- 264

  Fly   478 RRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETKAAKTLAIIVGMFIFCWCPFFTM-YII 541
            :||:|                            .::|.||.:|:.||:.:|:.||.|:|.: .:|
 Frog   265 KRQNN----------------------------LQLENKATRTMGIIISVFVMCWLPYFVLNVLI 301

  Fly   542 RPFCQDCVDPLL---FSVLFWLGYCNSAVNPMIYALFSKDFRFAFKR-IICRCFCSRQSVSLKSS 602
            .....|....:|   |..:.|||||||.:|||:||..::||:.|.|: :|||.:.|:..:     
 Frog   302 AAKGTDSTSRVLVNAFKFITWLGYCNSTINPMLYAFLNRDFQRALKKLLICRRWRSQVDI----- 361

  Fly   603 RRGSDMSAIRIRART 617
              |.||.:|...::|
 Frog   362 --GDDMVSIVTFSKT 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tmA_Octopamine_R 21..583 CDD:320191 115/563 (20%)
TM helix 1 22..48 CDD:320191 5/22 (23%)
TM helix 2 55..81 CDD:320191 14/25 (56%)
TM helix 3 93..123 CDD:320191 17/29 (59%)
TM helix 4 135..158 CDD:320191 7/23 (30%)
TM helix 5 292..321 CDD:320191 8/28 (29%)
TM helix 6 512..542 CDD:320191 11/30 (37%)
TM helix 7 551..576 CDD:320191 14/27 (52%)
LOC100490372XP_002937327.2 7tmA_amine_R-like 58..346 CDD:320098 115/563 (20%)
TM helix 1 58..83 CDD:320098 5/22 (23%)
TM helix 2 90..117 CDD:320098 14/26 (54%)
TM helix 3 128..158 CDD:320098 17/29 (59%)
TM helix 4 170..190 CDD:320098 6/19 (32%)
TM helix 5 214..270 CDD:320098 22/219 (10%)
TM helix 6 271..301 CDD:320098 11/29 (38%)
TM helix 7 311..339 CDD:320098 14/27 (52%)

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