DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and LOC100488258

DIOPT Version :10

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_012818683.1 Gene:LOC100488258 / 100488258 XenbaseID:XB-GENE-29079119 Length:333 Species:Xenopus tropicalis


Alignment Length:575 Identity:122/575 - (21%)
Similarity:175/575 - (30%) Gaps:283/575 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PANLISLAVLEF-INVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPFSATWE 81
            |||...:.:..| ..:|...||.|||.::....:|...|||.|::||.||.|:||.|:|:|....
 Frog    19 PANYSVMFIAMFGAIILTTVGNLLVIISISHFRQLHYPTNFLILSLATADFLIGLVVMPYSMVRS 83

  Fly    82 VFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAGIW- 145
            :...|.||||:|::...:|:.:||.||.:|..||:|||.||..|:.|...::|...:..:...| 
 Frog    84 LTSCWYFGDLFCKVHSCLDMTLCTGSIYHLFFISVDRYYAVCHPLHYYKNLTTNVIELFLLTTWS 148

  Fly   146 ---VLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPS 207
               |.||.:.|                                                      
 Frog   149 VSCVFSFGLVF------------------------------------------------------ 159

  Fly   208 PPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPP 272
                                                             |...||...|.:.   
 Frog   160 -------------------------------------------------SNVHTEGIQDYIT--- 172

  Fly   273 QNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFKTTK 337
                   |..|...|.||.::.:...|:|..|:||..:|:..|..|:..|               
 Frog   173 -------SYYCIGSCSLTLNKLWGTISSLICFFIPGALMIGIYMHIFSVA--------------- 215

  Fly   338 GSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLHHHDKI 402
                                   .||...:|::.|.|          |::            .|.
 Frog   216 -----------------------RNQAKLVHNHHSFQ----------PDK------------SKS 235

  Fly   403 KISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVASSCYL 467
            ||||                                                             
 Frog   236 KISV------------------------------------------------------------- 239

  Fly   468 QVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETKAAKTLAIIVGMFIFCW 532
                                                        |.|.||||||:|::|:|:|||
 Frog   240 --------------------------------------------RAERKAAKTLSIVMGVFLFCW 260

  Fly   533 CPFFTMYIIRPFCQDCVDPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRII 587
            .|||.:.:|.|:....|...|::|..||||.|||:||:|||||...|:.||..||
 Frog   261 LPFFILTVIDPYINFSVPEDLYNVFLWLGYFNSALNPIIYALFYPWFQKAFACII 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tmA_Octopamine_R 21..583 CDD:320191 115/566 (20%)
TM helix 1 22..48 CDD:320191 7/26 (27%)
TM helix 2 55..81 CDD:320191 14/25 (56%)
TM helix 3 93..123 CDD:320191 13/29 (45%)
TM helix 4 135..158 CDD:320191 5/26 (19%)
TM helix 5 292..321 CDD:320191 8/28 (29%)
TM helix 6 512..542 CDD:320191 17/29 (59%)
TM helix 7 551..576 CDD:320191 15/24 (63%)
LOC100488258XP_012818683.1 7tmA_TAAR2_3_4 23..311 CDD:320437 115/565 (20%)
TM helix 1 24..50 CDD:320437 7/25 (28%)
TM helix 2 57..83 CDD:320437 14/25 (56%)
TM helix 3 95..125 CDD:320437 13/29 (45%)
TM helix 4 137..160 CDD:320437 5/125 (4%)
TM helix 5 185..214 CDD:320437 8/28 (29%)
TM helix 6 240..270 CDD:320437 17/29 (59%)
TM helix 7 279..304 CDD:320437 15/24 (63%)

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