DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and drd4

DIOPT Version :10

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_002937535.2 Gene:drd4 / 100486482 XenbaseID:XB-GENE-990215 Length:414 Species:Xenopus tropicalis


Alignment Length:577 Identity:139/577 - (24%)
Similarity:207/577 - (35%) Gaps:231/577 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 NLISLAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAVLPFSATWE-VF 83
            |.::|.....:.|.:|.||.||..:|.....|::.||:|||:|||||||:.:.|||.....| |.
 Frog    62 NFLALVFGFILIVCIICGNVLVCLSVCTEKALKTTTNYFIVSLAVADLLLAVLVLPLYVYTEFVG 126

  Fly    84 KVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAKSLIAGIWVLS 148
            .||....:.|.:.:.:||.:|||||.||||||:||::||:.|:.|.......:...||:..|:.:
 Frog   127 GVWTLSLVLCDVLMTMDVMLCTASIFNLCAISVDRFIAVSIPLNYNRRQVDNRQLFLISTTWIFA 191

  Fly   149 FFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEASLPPSPPHIGN 213
            |.:..|.:                                  .||:::.|:.             
 Frog   192 FAVASPVI----------------------------------FGLNNVADRD------------- 209

  Fly   214 GNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLLNAPPQNRPQT 278
                                                                             
 Frog   210 ----------------------------------------------------------------- 209

  Fly   279 ISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGFKTTKGSKGIG 343
                 |..|:| .|..|::||::.||:||..:||..|..::           .|.:         
 Frog   210 -----PTMCKL-EDNNYIVYSSVCSFFIPCPIMLVLYCAMF-----------HGLR--------- 248

  Fly   344 SRFEEQRLT-LRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPS-PERLSKYATRRLHHHDKIKISV 406
             ::||.|.| ||.|...|                   |..|. |..|...:              
 Frog   249 -KWEETRKTKLRSHMSPG-------------------LKPPQCPALLLDRS-------------- 279

  Fly   407 SYPSSENISELAGHGDVGHERRQSGNALFAVHY--NGTNGRESTESQLYRQQQQHGVASSCYLQV 469
              |:...:.||        .....|:..|...|  ||                 ||:.:..|   
 Frog   280 --PTDSKLDEL--------NLYDQGDCPFPKSYVDNG-----------------HGIQTVAY--- 314

  Fly   470 GKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETKAAKTLAIIVGMFIFCWCP 534
                |.|  :.|...|        |..|         |.|....|.||.:.|.::||.|:|||.|
 Frog   315 ----PHL--KYSTNME--------PERK---------QAKINGRERKAMRVLPVVVGAFLFCWTP 356

  Fly   535 FFTMYIIRPFCQDCVDP-LLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRIICRC 590
            ||.::|.|..|:.|..| .|.|::.||||.|||:||:||.:|:.:||..|::::..|
 Frog   357 FFVVHITRALCESCYIPEQLISIVTWLGYVNSALNPVIYTIFNTEFRNYFRKVLRVC 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tmA_Octopamine_R 21..583 CDD:320191 136/567 (24%)
TM helix 1 22..48 CDD:320191 8/25 (32%)
TM helix 2 55..81 CDD:320191 15/25 (60%)
TM helix 3 93..123 CDD:320191 17/29 (59%)
TM helix 4 135..158 CDD:320191 5/22 (23%)
TM helix 5 292..321 CDD:320191 11/28 (39%)
TM helix 6 512..542 CDD:320191 14/29 (48%)
TM helix 7 551..576 CDD:320191 14/25 (56%)
drd4XP_002937535.2 7tmA_D4_dopamine_R 63..406 CDD:320434 136/567 (24%)
TM helix 1 64..90 CDD:320434 8/25 (32%)
TM helix 2 97..123 CDD:320434 15/25 (60%)
TM helix 3 136..166 CDD:320434 17/29 (59%)
TM helix 4 178..201 CDD:320434 5/56 (9%)
TM helix 5 217..246 CDD:320434 11/39 (28%)
TM helix 6 334..364 CDD:320434 14/29 (48%)
TM helix 7 374..399 CDD:320434 13/24 (54%)

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