DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oamb and adra2b

DIOPT Version :9

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_002932610.1 Gene:adra2b / 100485811 XenbaseID:XB-GENE-999343 Length:410 Species:Xenopus tropicalis


Alignment Length:582 Identity:157/582 - (26%)
Similarity:232/582 - (39%) Gaps:182/582 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LIKSVKWTEPANLISLAVLEFINVLVIGGNCLVIAAVFCSNKLRSVTNFFIVNLAVADLLVGLAV 73
            ::..:.::..|..:..|::.|:.:..|.||.|||.||..|..|::..|.|:|:||.||:||...:
 Frog     1 MVAPLSYSIQATAVIAAIITFLVLFTIFGNVLVIIAVLTSRSLKAPQNLFLVSLAAADILVATLI 65

  Fly    74 LPFSATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTYPSIMSTKKAK 138
            :|||...|:...|.||..||.::||:||..||:||::|||||||||.:|::.:.|.|..:.|:.|
 Frog    66 IPFSLANELMGYWYFGKTWCEMYLALDVLFCTSSIVHLCAISLDRYWSVSQAIEYNSKRTPKRIK 130

  Fly   139 SLIAGIWVLSFFICFPPLVGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLGLDSIKDQGEAS 203
            .:|..:|.|:..|..|||:            | ||..                     |||    
 Frog   131 CIILIVWTLAALISLPPLI------------Y-KGKS---------------------KDQ---- 157

  Fly   204 LPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSSTTETEMDLDLL 268
                                                                             
 Frog   158 ----------------------------------------------------------------- 157

  Fly   269 NAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAAVRTTRAINQGF 333
            ||.|:             |:|..:..|:|.|::.||:.|..:|:..|.|||..|.|..|..:...
 Frog   158 NAKPE-------------CKLNEEPWYILSSSICSFFAPCLIMILVYLRIYLIAKRRNRKNSTDK 209

  Fly   334 KTTKGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPERLSKYATRRLHH 398
            |..|.:.|:.||..:..|             :|.|       |.|..|..|.:..:..|...|| 
 Frog   210 KLKKMAPGLFSRTNKHSL-------------NSSH-------TQTQCGIISSQEKTGLALDDLH- 253

  Fly   399 HDKIKISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQLYRQQQQHGVAS 463
                 ..|...||.. .|..||.:....:.|..|      ...|||.|.            .|..
 Frog   254 -----CGVPVLSSTR-EERNGHSESFGLQPQGEN------LKHTNGCEP------------AVMD 294

  Fly   464 SCYLQVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETKAAKTLAIIVGMF 528
            :.....|..|.....:.|:.|.|          ||      |:.:.|   |.:....||:::|:|
 Frog   295 TVATVKGVMLMPKGAKDSDLSSA----------KK------KSYINR---EKRFTFVLAVVIGVF 340

  Fly   529 IFCWCPFFTMYIIRPFCQD-CVDP-LLFSVLFWLGYCNSAVNPMIYALFSKDFRFAFKRIIC 588
            :.||.|||..|.:...|.: |..| .:|...||:|||||::||:||.:|::|||.||:||:|
 Frog   341 VLCWFPFFFTYSLGAICTELCYIPDSVFQFFFWIGYCNSSLNPVIYTIFNQDFRKAFRRILC 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 55/124 (44%)
7tm_1 37..>181 CDD:278431 59/143 (41%)
adra2bXP_002932610.1 7tm_4 20..>152 CDD:304433 59/144 (41%)
7tm_1 29..386 CDD:278431 142/536 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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