DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oamb and adrb2

DIOPT Version :10

Sequence 1:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001116897.2 Gene:adrb2 / 100144654 XenbaseID:XB-GENE-494302 Length:419 Species:Xenopus tropicalis


Alignment Length:591 Identity:134/591 - (22%)
Similarity:210/591 - (35%) Gaps:273/591 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EDLIKSVKWTEPAN-------LISLAVLEFINVLVIG-GNCLVIAAVFCSNKLRSVTNFFIVNLA 63
            |.|:.:|..|..|:       ::.:.::....||||. ||.|||.|:....:|::|||:||.:||
 Frog    16 EQLVSNVSNTSNASDKPGDAWMVGMGIIMSCIVLVIVLGNVLVITAIAKFQRLQTVTNYFITSLA 80

  Fly    64 VADLLVGLAVLPFSATWEVFKVWIFGDLWCRIWLAVDVWMCTASILNLCAISLDRYVAVTRPVTY 128
            .||||:||.|:||.|:..:...|:|.:.||..|.:||:...||||..||.|::|||.|:|.|..|
 Frog    81 CADLLMGLIVVPFGASSIILDTWVFNNFWCEFWTSVDILCVTASIETLCVIAVDRYFAITSPFRY 145

  Fly   129 PSIMSTKKAKSLIAGIWVLSFFICFPPL-VGWKDQKAVIQPTYPKGNHTLYYTTTMSSSEDGQLG 192
            .|:::..||:.:|..:||:|....|.|: :.|                                 
 Frog   146 QSLLTKCKARIVILLVWVVSTLTSFLPIYMHW--------------------------------- 177

  Fly   193 LDSIKDQGEASLPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATTTTTASSSS 257
               .:.:.|::|          :.|:  ||                                   
 Frog   178 ---YRIEEESAL----------HCYD--DP----------------------------------- 192

  Fly   258 TTETEMDLDLLNAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFFYWRIYRAA 322
                                    ||   |....:..|.:.|::.|||:|:.||:|.|.|:::.|
 Frog   193 ------------------------SC---CFFFTNPAYAISSSIISFYLPLVVMIFVYARVFQEA 230

  Fly   323 VRTTRAINQGFKTTKGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTTLGTPSPER 387
            .:..:.|::       |:|   ||..|           :||||                      
 Frog   231 KKQLKKIDK-------SEG---RFHNQ-----------NNQQD---------------------- 252

  Fly   388 LSKYATRRLHHHDKIKISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNGRESTESQL 452
                                                                  |||::      
 Frog   253 ------------------------------------------------------TNGKQ------ 257

  Fly   453 YRQQQQHGVASSCYLQVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVKRFRMETKA 517
                                                      .||:..:..:|        |.||
 Frog   258 ------------------------------------------GNKRTSKFWLK--------EHKA 272

  Fly   518 AKTLAIIVGMFIFCWCPFFTMYIIRPFCQDCVDPLLFSVLFWLGYCNSAVNPMIYALFSKDFRFA 582
            .|||.||:|.|..||.|||.:.|::...:|.:...:::.|.|:||.|||.||:||.. |.|||:.
 Frog   273 LKTLGIIMGTFTLCWLPFFIVNIVQVMHKDFIPVKVYNFLNWVGYVNSAFNPLIYCR-SPDFRYT 336

  Fly   583 FKRIIC 588
            |:.::|
 Frog   337 FQELLC 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OambNP_001262774.1 7tmA_Octopamine_R 21..583 CDD:320191 127/563 (23%)
TM helix 1 22..48 CDD:320191 10/26 (38%)
TM helix 2 55..81 CDD:320191 16/25 (64%)
TM helix 3 93..123 CDD:320191 15/29 (52%)
TM helix 4 135..158 CDD:320191 8/23 (35%)
TM helix 5 292..321 CDD:320191 11/28 (39%)
TM helix 6 512..542 CDD:320191 16/29 (55%)
TM helix 7 551..576 CDD:320191 11/24 (46%)
adrb2NP_001116897.2 7tmA_Beta2_AR 38..337 CDD:341355 127/562 (23%)
TM helix 1 39..65 CDD:341355 10/25 (40%)
TM helix 2 72..99 CDD:341355 16/26 (62%)
TM helix 3 110..140 CDD:341355 15/29 (52%)
TM helix 4 152..175 CDD:341355 8/22 (36%)
TM helix 5 200..232 CDD:341355 12/31 (39%)
TM helix 6 267..297 CDD:341355 17/37 (46%)
TM helix 7 306..331 CDD:341355 11/25 (44%)

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