DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP1 and blanks

DIOPT Version :9

Sequence 1:NP_728449.1 Gene:DIP1 / 43981 FlyBaseID:FBgn0024807 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_647966.1 Gene:blanks / 38620 FlyBaseID:FBgn0035608 Length:324 Species:Drosophila melanogaster


Alignment Length:342 Identity:107/342 - (31%)
Similarity:166/342 - (48%) Gaps:73/342 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 NPDA--DAIASKLPMPVIIK----------EEPISVNDEPSVDNIEDNTSASTSASGIGGKIPFK 142
            ||.|  ||:| .:|:...:|          :|..:|:.||..  :.|..::|...:         
  Fly    26 NPSAEEDAVA-VIPLADNLKKTAMGGENKSDEKGTVSSEPKA--LSDQITSSMRVT--------- 78

  Fly   143 KIFQKRKKSSERTRD----------KKLRQNR--QLRKSMLP---KNALMALNEVKGVTISDFTI 192
                |.|.:.:::.|          ||.::|:  ::|...:|   |:|||.|||:||||:.:..|
  Fly    79 ----KNKIADDKSSDVITDDATNGRKKQKKNKKAKIRPLTMPVTSKDALMVLNELKGVTVDNMQI 139

  Fly   193 DSNTDGGFTAVVTVNSNQYEGKGTSKMTAKNAACEKAWRDFIIAKMTPKPPRIHQVEMGSEPMDI 257
            ..:.:|...|.|.|||.:||.:|:|..:|:|||||||.::.:..||        :..:......:
  Fly   140 KRDHEGKIMARVVVNSKKYEAEGSSVNSARNAACEKALQEILTTKM--------KAVLDGPGKSL 196

  Fly   258 NEDEADAPDDDLPMLNLASFAIYKLFAEWEREGYVVPEMHPSANAAQQAGGDAGTPVPPVPKEPK 322
            ..||     ||: :..:||:||:||..||:.:...|..::......|       |.|    .|||
  Fly   197 ESDE-----DDI-LEKMASYAIHKLGEEWKTDDIDVATLYNDLKNKQ-------TSV----VEPK 244

  Fly   323 KPPVRTELPSGWETMHPATILCIMRPGLNYVDYGSSGDKTNGMQHLGIMVDNQEFHANGRSKKIA 387
            ||     ||..|:.|||..:|..|||...::..|.:|...|....:.:.|||.||:|.|.|||.|
  Fly   245 KP-----LPETWKNMHPCMVLNYMRPQCTFIVSGGTGTNQNNTFSMSVCVDNCEFNAEGPSKKAA 304

  Fly   388 RRNVAVKVCNSLFGTNF 404
            |..::..|||.||||::
  Fly   305 RYKLSALVCNKLFGTDY 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP1NP_728449.1 DSRM 172..231 CDD:238007 31/61 (51%)
blanksNP_647966.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2CDYR
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D116676at33392
OrthoFinder 1 1.000 - - FOG0012721
OrthoInspector 1 1.000 - - mtm9633
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.820

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