DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP1 and Adarb1

DIOPT Version :10

Sequence 1:NP_728449.1 Gene:DIP1 / 43981 FlyBaseID:FBgn0024807 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_006256337.1 Gene:Adarb1 / 25367 RGDID:2033 Length:775 Species:Rattus norvegicus


Alignment Length:326 Identity:95/326 - (29%)
Similarity:141/326 - (43%) Gaps:67/326 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 EEPIS-----VNDEPSVDNIEDNTSASTS-------ASGIGGKIPFKKIFQKRKKSSERTRDKKL 160
            ||.:|     |.:..::||:....|::..       ::|.||....|:..::......:.|   |
  Rat    70 EENMSSSSTDVKENRNLDNMPPKDSSTPGPGEGIPLSNGGGGSTSRKRPLEEGSNGHSKYR---L 131

  Fly   161 RQNRQLRKSMLPKNALMALNEVK-GVTISDFTIDSNTDGG------FTAVVTVNSNQYEGKGTSK 218
            ::.|:....:|||||||.|||:| |:   .:.:.|.|  |      |...|.||...:||.|.:|
  Rat   132 KKRRKTPGPVLPKNALMQLNEIKPGL---QYMLLSQT--GPVHAPLFVMSVEVNGQVFEGSGPTK 191

  Fly   219 MTAKNAACEKAWRDFIIAKMTPKPPRIHQVEMG---SEPMDINEDEADAPDDDLPMLNLASFAIY 280
            ..||..|.|||.|.|:   ..|.....| :.||   |...|...|:||.||              
  Rat   192 KKAKLHAAEKALRSFV---QFPNASEAH-LAMGRTLSVNTDFTSDQADFPD-------------- 238

  Fly   281 KLFAEWEREGYVVPEMHPSANA--AQQAGGD---AGTPV------PPVPKEPKKPPVRTELPSGW 334
            .||..:|......|..:..:|.  :..:.||   :.:||      ||:|..|..||     ||| 
  Rat   239 TLFNGFETPDKSEPPFYVGSNGDDSFSSSGDVSLSASPVPASLTQPPLPIPPPFPP-----PSG- 297

  Fly   335 ETMHPATILCIMRPGLNYVDYGSSGDKTNGMQHLGIMVDNQEFHANGRSKKIARRNVAVKVCNSL 399
              .:|..||..:||||.|.....||:.......:.::||.|.|..:||:||:|:...|.....::
  Rat   298 --KNPVMILNELRPGLKYDFLSESGESHAKSFVMSVVVDGQFFEGSGRNKKLAKARAAQSALATV 360

  Fly   400 F 400
            |
  Rat   361 F 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP1NP_728449.1 PRK12323 <45..>119 CDD:481241 4/15 (27%)
DSRM_SF 173..233 CDD:444671 28/66 (42%)
DSRM_SF 337..399 CDD:444671 20/61 (33%)
Adarb1XP_006256337.1 DSRM_RED1_rpt1 139..210 CDD:380724 31/78 (40%)
DSRM_RED1_rpt2 296..365 CDD:380727 23/69 (33%)
ADEAMc 386..772 CDD:214718
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.