DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lip2 and Lipa

DIOPT Version :9

Sequence 1:NP_524667.1 Gene:Lip2 / 43980 FlyBaseID:FBgn0024740 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_036864.3 Gene:Lipa / 25055 RGDID:3008 Length:397 Species:Rattus norvegicus


Alignment Length:425 Identity:108/425 - (25%)
Similarity:179/425 - (42%) Gaps:70/425 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GGSGCIGAIKVMLIVCAIGRNAHSSPPESRYKWT--TMDWLEAQNVSHEVHNVTTADGYQLQLQR 64
            |.:|.|.|:                .||:....|  .|.|    ....|.|:|.|.|||.|.:.|
  Rat    19 GPTGTISAV----------------DPEANMNVTEIIMHW----GYPGEEHSVQTGDGYILGVHR 63

  Fly    65 LPR-------LGAKPVL-LVHGLLGSSLGWVCMGPERSLAFQLHHREYDVWLANLRGVSPYGRQH 121
            :|.       .|.|||: |.||.|..|..||......||.|.|....:|||:.|.|| :.:.|:|
  Rat    64 IPHGRKNQFDKGPKPVVYLQHGFLADSSNWVTNIDNNSLGFILADAGFDVWMGNSRG-NTWSRKH 127

  Fly   122 IDLTDVMVEFWRFSFHEHGAYDLPAIIDHMAKVTGGEQLASRGGPGQDEEQIHHQVVLIGHSQAF 186
            ..|:....|:|.|||.|...|||||.|:::...||.|||                 ..:||||..
  Rat   128 KTLSVSQDEYWAFSFDEMAKYDLPASINYILNKTGQEQL-----------------YYVGHSQGC 175

  Fly   187 NAFLVLCAVHPRFNQRIQLIQALAPLARLHRQVRFDS---FQVRRLMKFIKKRQKAYKFEIFPPG 248
            ....:..:..|...:::::..||||:..|:    |.|   .::.||...:.:.....| :..|..
  Rat   176 TIGFIAFSQMPELAKKVKMFFALAPVLSLN----FASGPMVKLGRLPDLLLEDLFGQK-QFLPQS 235

  Fly   249 YFRK-----VCQ--AKRDLCEYYAKQLVGSAQNNKKLLEAFNY-EYLLQGGSPREIKHLQQIWKS 305
            ...|     :|.  ..::||......:.|..:.|..:.....| .:...|.|.:.:.|..|:.|.
  Rat   236 AMVKWLSTHICTHVIMKELCANIFFLICGFNEKNLNMSRVDVYTTHCPAGTSVQNMVHWTQVVKY 300

  Fly   306 GDFISYDFGTAE-NLQVYHSVEALSYNISQITVPIILYFGETDAIATPEGVHAIYARMLRSVKS- 368
            ....::|:|::: |...|:......|:|..:.:|..|:.|..|.:|....::.    :|..:.: 
  Rat   301 HKLQAFDWGSSDKNYFHYNQSYPPLYSIKDMQLPTALWSGGKDWLADTSDINI----LLTEIPTL 361

  Fly   369 VRRINSKKFNHLDFLISGDVKSLVNDKLIEHMEQF 403
            |...|..:::||||:...|....:.::::..|:::
  Rat   362 VYHKNIPEWDHLDFIWGLDAPWRLYNEVVSLMKKY 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lip2NP_524667.1 PLN02872 24..407 CDD:215470 104/403 (26%)
Abhydro_lipase 48..90 CDD:282003 21/49 (43%)
LipaNP_036864.3 PLN02872 7..394 CDD:215470 107/421 (25%)
Abhydro_lipase 35..96 CDD:282003 24/64 (38%)
Abhydrolase_5 78..>203 CDD:289465 48/142 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335572
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2624
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55134
OrthoDB 1 1.010 - - D408561at33208
OrthoFinder 1 1.000 - - FOG0000083
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11005
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X80
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.860

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