Sequence 1: | NP_651960.2 | Gene: | trio / 43974 | FlyBaseID: | FBgn0024277 | Length: | 2263 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_013529.3 | Gene: | TUS1 / 851145 | SGDID: | S000004417 | Length: | 1307 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 1562 | Identity: | 286/1562 - (18%) |
---|---|---|---|
Similarity: | 481/1562 - (30%) | Gaps: | 621/1562 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 449 SDIQSLETAIR---THQSLYEAMCQAYTEVHSTSKKLLYQLDHLVQVCNQPPPPGV--------- 501
Fly 502 ---------PDHRKNSNNGSF--NKYERQNPAADYSEGASHVLAVIHQILSHHRTLEAKW----- 550
Fly 551 ------------------HQERLRLHQ------------TLALRLFQEDVKQVLDWLKNHGEVFL 585
Fly 586 RKNTGIGRNFHKA--RVYQTSHDNFENVAQNTYSNAQK-----LLAAAD-ELARSGEADPNEIYS 642
Fly 643 VARELELQVGSFAERVEQRRRRLDMAVIFYTHEKDVTAWIDKLRTDVSTDETRLSQENLEGIERI 707
Fly 708 LQQYQ------RDQQESSV-NVCLTTISQGEALLQEMRSLEYA---------------------- 743
Fly 744 DNT-GSIAAL-----------------EATLEKLNKQKVEL-EELW---------------SARK 774
Fly 775 FRADLILRLRYFERDARLLSVQMEMWSEELQHADLSRDYQ-KA------EQLIRMHNESVTEIQN 832
Fly 833 ATYEVVQQGQDLLQLFENAG-------------FISMADATHTAQARIEY-------LLDFLRER 877
Fly 878 EIDLEEMSEAKRAKLEQAVQLC-----QFQNDANQVISWIRNGEAMLVASFVTPNSLQEAEQLR- 936
Fly 937 --KGHEQFQIAIEKTHTSAVQ----VKYRADALINANHYDPLSIDEI--------SDDVTKKWQQ 987
Fly 988 LVTYAEERHKLVTASINFYKTAEQVCSVLDSLEREYKREDDWCDGG----GGSDKAQAIVQLISK 1048
Fly 1049 HQEQKEAFLKACTLARRTAETFLKYANRSQQCYQYKGNCEGHVKSKLDKLLTQENQVLDYWTLRK 1113
Fly 1114 KSLDQCQQFVLFERSAKQAIEWIHNTGEAYLSSRSNLVGISKEETEGL-LKEHNEFRSTAKETRE 1177
Fly 1178 RVKLLIQLADSLVEKGHAHASDIKQWVASVDQRYKDFSNRMDSYCEQLEKSLGMSQQQLLLGSDG 1242
Fly 1243 NSSISSSSGDRHSDPTLEAKLNSSNKENKEINEEKRKSARRKEFIMAELMQTERAYVNDLATCIK 1307
Fly 1308 CFLEEFRAGKSVPSALIGQEDVIFGNIKEIHHFHQKIFLRELEKYETMPEDVGHCFVTWASKFDM 1372
Fly 1373 YVHYCKNKPTSNNLLVQHGGSFFEELQRRLEVDHPLPAYLIKPVQRITKYQLLLKDLLSCCEE-- 1435
Fly 1436 SHGEI------KEGLEVM--------------LNVPKKANDAMHLSLL----------------- 1463
Fly 1464 -----------ENCDVSV---DKLGEVVLQDAFQAWDTKQII--RKGRERRVFLFELYLLFAKEV 1512
Fly 1513 KESNVVKYQFK----SKLMTTDMGITEHIEGDETKFAVWTGRSPMLSDCRIVLKATSLETKQIWV 1573
Fly 1574 KKLREVMQETCFSGTSLTLPKSPAKHSGSSQRSSRDLDEQLTENDHDRCSLASFGSGNTTDSDNK 1638
Fly 1639 LGNQEATWVVADYIATSGS---NELSVSKGQ------QVEIVEPPTAGEP----------DFC-- 1682
Fly 1683 ---------------LVRLNPQHDDAAVQEG---LVPVSVLKPPPGSHKHGSGTAANAASSAGSQ 1729
Fly 1730 KS 1731 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trio | NP_651960.2 | SEC14 | 13..152 | CDD:214706 | |
SPEC | 314..>468 | CDD:238103 | 5/21 (24%) | ||
SPEC | 563..778 | CDD:238103 | 56/285 (20%) | ||
SPEC | 782..997 | CDD:238103 | 43/261 (16%) | ||
SPEC | 897..1119 | CDD:238103 | 42/245 (17%) | ||
SPEC | 1125..1226 | CDD:197544 | 11/101 (11%) | ||
RhoGEF | 1287..1456 | CDD:279015 | 39/190 (21%) | ||
PH1_Kalirin_Trio_like | 1462..1584 | CDD:270060 | 29/158 (18%) | ||
PH | 1495..1580 | CDD:278594 | 15/88 (17%) | ||
SH3_Kalirin_1 | 1643..1707 | CDD:212786 | 19/102 (19%) | ||
RhoGEF | 1945..2122 | CDD:279015 | |||
PH2_Kalirin_Trio_p63RhoGEF | 2130..2260 | CDD:270061 | |||
TUS1 | NP_013529.3 | RhoGEF | 469..655 | CDD:238091 | 37/208 (18%) |
CNH | 939..1287 | CDD:214481 | 78/404 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3601 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |