Sequence 1: | NP_651960.2 | Gene: | trio / 43974 | FlyBaseID: | FBgn0024277 | Length: | 2263 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001074764.1 | Gene: | Arhgef26 / 622434 | MGIID: | 1918053 | Length: | 869 | Species: | Mus musculus |
Alignment Length: | 830 | Identity: | 161/830 - (19%) |
---|---|---|---|
Similarity: | 283/830 - (34%) | Gaps: | 231/830 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 1520 YQFKSKLMTTDMGITE-----------HIEGDETKFAVWTGRSPMLSDCRIVLKATSLETKQIWV 1573
Fly 1574 KKLREVMQETCFSGTSLTLPKSPAKHSGSSQRSSRDLDEQLTENDHDRCSLASFGSGNTTDSDNK 1638
Fly 1639 LG-NQEATWVVADYIATSGSNEL---SVSKGQQVEIVEPPTAGEPDFCLVRLNPQHDDAAVQEGL 1699
Fly 1700 VPVSVLKPPPGSHKHGS----GTAANAASSAGSQK---SDMQDQSNRSKADALSSSTKRRGFSGR 1757
Fly 1758 NWLPLMNRKGTDKPPSSKPLVKKPSEKNLRTPQKHAEELAEQQNQQPGASPATVLPSSQFPSSTQ 1822
Fly 1823 HPGGAGAGDYEPDEEVGLELPPPMKPIQEPHLIANGPPAFAKDAKESSGNMASPGKMDGNPLSEI 1887
Fly 1888 EEIVKTTTEQHESNSR--------VDGGG---GVENA--STNGHGRSHD-NNDESHTAVSDKA-- 1936
Fly 1937 ----------------AALK-------------KRQCVFAELMSTEEAYVQDLHEIVNGYMT--E 1970
Fly 1971 INNTNSDIPMPEDLKGGKMKLVFNNIKDIYEWHRDFF--LRALRNCQKSPADLGPLI-KRSATKF 2032
Fly 2033 ALYYTYCSNKPLSEYIVS---AHYQYFDSIRQKLGHRLDLSNL-----IIKPVQRITKYELLIKE 2089
Fly 2090 IIKATEGAGLYKEVPMLQEAYQQMKVVVKTV------------NDMMVVLRSLQDFD-------- 2134
Fly 2135 --------GEITA--QGSLLMQGPMNCVVDAAQKHRELQVFLFQQIIIFADIEKTKNQYASPIFK 2189
Fly 2190 YRSHI--------QLNHMQMKELGDCRFQIRSTDPKIPEMTIICQAASQE 2231 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trio | NP_651960.2 | SEC14 | 13..152 | CDD:214706 | |
SPEC | 314..>468 | CDD:238103 | |||
SPEC | 563..778 | CDD:238103 | |||
SPEC | 782..997 | CDD:238103 | |||
SPEC | 897..1119 | CDD:238103 | |||
SPEC | 1125..1226 | CDD:197544 | |||
RhoGEF | 1287..1456 | CDD:279015 | |||
PH1_Kalirin_Trio_like | 1462..1584 | CDD:270060 | 17/74 (23%) | ||
PH | 1495..1580 | CDD:278594 | 16/70 (23%) | ||
SH3_Kalirin_1 | 1643..1707 | CDD:212786 | 16/66 (24%) | ||
RhoGEF | 1945..2122 | CDD:279015 | 44/201 (22%) | ||
PH2_Kalirin_Trio_p63RhoGEF | 2130..2260 | CDD:270061 | 21/128 (16%) | ||
Arhgef26 | NP_001074764.1 | RhoGEF | 441..620 | CDD:279015 | 44/192 (23%) |
PH_ephexin | 641..779 | CDD:269929 | 20/124 (16%) | ||
SH3_ARHGEF16_26 | 791..845 | CDD:212871 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3601 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |