| Sequence 1: | NP_651960.2 | Gene: | trio / 43974 | FlyBaseID: | FBgn0024277 | Length: | 2263 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_697546.3 | Gene: | ngef / 569090 | ZFINID: | ZDB-GENE-130530-794 | Length: | 718 | Species: | Danio rerio |
| Alignment Length: | 577 | Identity: | 128/577 - (22%) |
|---|---|---|---|
| Similarity: | 232/577 - (40%) | Gaps: | 141/577 - (24%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1129 AKQAIEWIHNTGEAYLSSRSNLVG------------ISKEETEGLLKEHNEFRSTAKETRERVKL 1181
Fly 1182 LIQLADS---LVEKGHAHASDIKQWVASVDQRYKDFSNRMDSYCEQLEKSLGMSQQQLLLGSDGN 1243
Fly 1244 SSISSSSGDRHSDPTLEAKLNSS-NKEN--KEINEEKR----KSARRKEFI----MAELMQTERA 1297
Fly 1298 YVNDLATCIKCFLEEFRAGKSVPSAL--IGQEDV--IFGNIKEIHHFHQKIFLRELE---KYETM 1355
Fly 1356 PEDVGHCFVTW---ASKFDMYVHYCKN---KPTSNNLLVQHGGSFFEE---LQRRLEVDH-PLPA 1410
Fly 1411 YLIKPVQRITKYQLLLKDLLSCCEE----------SHGEIKEGLEVMLNVPKKAND-AMHLSLLE 1464
Fly 1465 NCDVSVDKLGEVVLQDAFQAWDTKQIIRKG--------------RERR------VFLFELYLLFA 1509
Fly 1510 KEVKESNVVKYQF-----KSKLMTTDMG----------ITEHIEGDETKFAVWTGRSPMLSDCRI 1559
Fly 1560 VLKATSLETKQIWVKKLREVMQETCFSGTSLTLPKSPAKHSGSSQRSSRDLDEQLTE 1616 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| trio | NP_651960.2 | SEC14 | 13..152 | CDD:214706 | |
| SPEC | 314..>468 | CDD:238103 | |||
| SPEC | 563..778 | CDD:238103 | |||
| SPEC | 782..997 | CDD:238103 | |||
| SPEC | 897..1119 | CDD:238103 | |||
| SPEC | 1125..1226 | CDD:197544 | 22/111 (20%) | ||
| RhoGEF | 1287..1456 | CDD:279015 | 48/199 (24%) | ||
| PH1_Kalirin_Trio_like | 1462..1584 | CDD:270060 | 29/156 (19%) | ||
| PH | 1495..1580 | CDD:278594 | 23/105 (22%) | ||
| SH3_Kalirin_1 | 1643..1707 | CDD:212786 | |||
| RhoGEF | 1945..2122 | CDD:279015 | |||
| PH2_Kalirin_Trio_p63RhoGEF | 2130..2260 | CDD:270061 | |||
| ngef | XP_697546.3 | RhoGEF | 275..454 | CDD:279015 | 47/195 (24%) |
| PH_ephexin | 475..601 | CDD:269929 | 25/140 (18%) | ||
| SH3 | 615..668 | CDD:302595 | 6/20 (30%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3601 |
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.030 | |||||