| Sequence 1: | NP_651960.2 | Gene: | trio / 43974 | FlyBaseID: | FBgn0024277 | Length: | 2263 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_005167338.1 | Gene: | arhgef16 / 567180 | ZFINID: | ZDB-GENE-081104-446 | Length: | 662 | Species: | Danio rerio |
| Alignment Length: | 542 | Identity: | 123/542 - (22%) |
|---|---|---|---|
| Similarity: | 208/542 - (38%) | Gaps: | 139/542 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1127 RSAKQAIEWIHNTGEAYLSSRSNLVGISKEETEGLLKEHNEFRSTAKETRERVKLLIQLADSLVE 1191
Fly 1192 KGHAHASDIKQWVASVDQRYKDFSNRMDSYCEQLEKSLGMS-----QQQLLLGSDGNSSISSSSG 1251
Fly 1252 DRHSDPTLEAKLN--------SSNKENKE------INEEKRKSARRKEFIMAELMQTERAYVNDL 1302
Fly 1303 ATCIKCFLEEFRAGKSVPSALIGQEDVIFGNIKEIHHFHQKIFLRELEK-YETMP--EDVGHCFV 1364
Fly 1365 TWASK-FDMYVHYCKNKPTSNNLL--VQHGGSFFEELQRRLEVDH-----PLPAYLIKPVQRITK 1421
Fly 1422 YQLLLKDLLSCCEESHGEIKE------GLEVMLNVPKKAND-AMHLSLLENCDVSVDKLGEVVLQ 1479
Fly 1480 DAFQAWDTKQIIRKGRE-----------RRVFLFELYLLF---------AKEVKESNVVKYQFKS 1524
Fly 1525 KLMTTDMGITEHIEGDE----TKFAVWTGRSPMLSDCR---IVLKATSLETKQIWVKKLREVMQE 1582
Fly 1583 TC--------FSGTSLTLPKSP 1596 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| trio | NP_651960.2 | SEC14 | 13..152 | CDD:214706 | |
| SPEC | 314..>468 | CDD:238103 | |||
| SPEC | 563..778 | CDD:238103 | |||
| SPEC | 782..997 | CDD:238103 | |||
| SPEC | 897..1119 | CDD:238103 | |||
| SPEC | 1125..1226 | CDD:197544 | 19/98 (19%) | ||
| RhoGEF | 1287..1456 | CDD:279015 | 44/185 (24%) | ||
| PH1_Kalirin_Trio_like | 1462..1584 | CDD:270060 | 35/148 (24%) | ||
| PH | 1495..1580 | CDD:278594 | 28/111 (25%) | ||
| SH3_Kalirin_1 | 1643..1707 | CDD:212786 | |||
| RhoGEF | 1945..2122 | CDD:279015 | |||
| PH2_Kalirin_Trio_p63RhoGEF | 2130..2260 | CDD:270061 | |||
| arhgef16 | XP_005167338.1 | RhoGEF | 255..434 | CDD:279015 | 44/186 (24%) |
| PH_ephexin | 456..577 | CDD:269929 | 32/131 (24%) | ||
| PH | 469..574 | CDD:278594 | 29/115 (25%) | ||
| SH3_ARHGEF16_26 | 586..639 | CDD:212871 | 5/13 (38%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3601 |
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.030 | |||||