Sequence 1: | NP_651960.2 | Gene: | trio / 43974 | FlyBaseID: | FBgn0024277 | Length: | 2263 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005162130.1 | Gene: | arhgef3l / 553761 | ZFINID: | ZDB-GENE-050522-85 | Length: | 532 | Species: | Danio rerio |
Alignment Length: | 519 | Identity: | 116/519 - (22%) |
---|---|---|---|
Similarity: | 199/519 - (38%) | Gaps: | 126/519 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 1156 EETEGLLKEHNEFRSTAKETRERVKLLIQLADSLVEKGHAHASDIKQWVASV--DQRYKDF--SN 1216
Fly 1217 RM---DSYCEQLEKSL--GMSQQQLL----------LGSDGNSSISSSSGDRHSDPTLEAKLNSS 1266
Fly 1267 N---KENKEI---------NEEKRKSARRKEFIMAELMQTERAYVNDLATCIKCFLEEFRAGKSV 1319
Fly 1320 PSALIGQEDVIFGNIKEIHHFHQKIFLR--ELEKYETMPEDVGHCFVTWASKFDMYVHYCKNKPT 1382
Fly 1383 SNNLLVQ--------------HGGSFFEELQRRLEVDHPLPAYLIKPVQRITKYQLLLKDLLSCC 1433
Fly 1434 EESHGE---IKEGLEVMLNVPKKANDAMHLSLLENCDVSVDKLGEVVLQ----DAFQAWDTKQII 1491
Fly 1492 R----------------KGRERRVFLFELYLLFAKEVKE--SNVVKYQ-FKSKLMTTDMGITEHI 1537
Fly 1538 EG---------------DETK--FAV-WTGRSPMLSDCRIVLKATSLETKQIWVKKLREVMQET 1583 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trio | NP_651960.2 | SEC14 | 13..152 | CDD:214706 | |
SPEC | 314..>468 | CDD:238103 | |||
SPEC | 563..778 | CDD:238103 | |||
SPEC | 782..997 | CDD:238103 | |||
SPEC | 897..1119 | CDD:238103 | |||
SPEC | 1125..1226 | CDD:197544 | 21/76 (28%) | ||
RhoGEF | 1287..1456 | CDD:279015 | 43/187 (23%) | ||
PH1_Kalirin_Trio_like | 1462..1584 | CDD:270060 | 36/163 (22%) | ||
PH | 1495..1580 | CDD:278594 | 27/105 (26%) | ||
SH3_Kalirin_1 | 1643..1707 | CDD:212786 | |||
RhoGEF | 1945..2122 | CDD:279015 | |||
PH2_Kalirin_Trio_p63RhoGEF | 2130..2260 | CDD:270061 | |||
arhgef3l | XP_005162130.1 | RhoGEF | 165..341 | CDD:279015 | 43/186 (23%) |
PH_RhoGEF3_XPLN | 355..489 | CDD:269976 | 31/136 (23%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3601 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.940 |