Sequence 1: | NP_651960.2 | Gene: | trio / 43974 | FlyBaseID: | FBgn0024277 | Length: | 2263 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001020747.2 | Gene: | Ccdc141 / 545428 | MGIID: | 1919735 | Length: | 1531 | Species: | Mus musculus |
Alignment Length: | 1871 | Identity: | 340/1871 - (18%) |
---|---|---|---|
Similarity: | 592/1871 - (31%) | Gaps: | 642/1871 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 266 QQSRSVGGNPDMSAAVNKALRQIELIHTGQEKLLMLWQHKKVKLDQCFQW---RLFEQDCEKMFD 327
Fly 328 WILHNRDVFQMSYVEIGHNYSVAKSLQDEHQKFAVASMNVSVNIDRILAVAARLIESQHYAAQHI 392
Fly 393 KTLAQRLDRTWKDFAAGLDERTAVLQLSVLFHHKAEQYCNSVASWAAACQASQPLPSDIQSLETA 457
Fly 458 IRTHQSLYEAMCQAYTEVHSTSKKLLYQLDHLVQVCNQPPPPGVPDHRKNSNNGSFNKYERQNPA 522
Fly 523 ADYSEGASHVLAVIHQILSHHRTLEAKWHQERLRLHQTLALRLFQEDVKQVLDWLKNHGEVFLRK 587
Fly 588 NTGIGRNFHKARVYQTSHDNFENVAQNTYSNAQKLLAAADELARSGEADPNEIYSVARELELQVG 652
Fly 653 SFAERVEQRRRRLD--------------MAVIFYTHEKDVTAWIDKLRTDVSTDETRLS-QENLE 702
Fly 703 GIERILQQYQRDQQESSVNVCLTTISQGEALLQEMRSLEYADNTGSIAALEATLEKLNKQKVELE 767
Fly 768 ELWSARKFRADLILRLRYFERDARLLSV--QMEMWSEELQHADLSRDYQKAEQLIRMHNESVTEI 830
Fly 831 QNATYEVVQQGQDLLQLFENAGFISMADATHTAQARIEYLLDFLREREIDLEEM----SEAKRAK 891
Fly 892 LEQAVQLCQFQNDANQVISWIRNGEAMLVASFVTPNSLQEAEQLRKGHEQFQIAIEKT-HTSAVQ 955
Fly 956 VKYRADALINANHYDPLSIDEISDDVTK-KW--QQLVTYAEE---RHKLVTASINFYKTAEQVCS 1014
Fly 1015 VLDSLEREYKREDDWCDGGGGSDKAQAIVQLISKHQEQK-EAFLKACTLARRTAETFLKYANRSQ 1078
Fly 1079 QCYQYKGNCEGHVKSKLDKLLTQENQVLDYWTLRKKSLDQCQQFVLFERSAKQAIEWIHNTGEAY 1143
Fly 1144 LSSRSNL----VGISKEETEG--LLKEHNEFRSTAKETRERVKLL--IQLADSLVEKGHA--HAS 1198
Fly 1199 DI-KQWVASVDQRYKDFSNRMDSYCEQLEKSLGMSQQQL-----LLGSDGNSSISSSSGDRHSDP 1257
Fly 1258 TLEAKLNSSNKENKEINEEKRKSARRKEFIMAELMQTERAYVNDLATCIKCFLEEFRAGKSVPSA 1322
Fly 1323 LIGQEDVIFGNIKEIHHFHQKIFLRELEKYETMPEDVGHCFVTWASKFDMYVHYCKNKPTSNNLL 1387
Fly 1388 VQH---GGSFFEELQ--------RRLEVDH------PLPAYLIKPVQRITKYQLLLKDL------ 1429
Fly 1430 ------------------LSCCEE---SHGEIKEGLEVMLNVPKKANDAMHLSLLENCDVSVDKL 1473
Fly 1474 GE-----VVLQDAFQAWDTK----QIIRKGRE----------------RRVFLFELYLLFAKEVK 1513
Fly 1514 ESNVVKYQFKSKLMTTDMGITEHIE----------GDETKFAVWTGRSPMLSDCR---------- 1558
Fly 1559 ----------------------IVLKATSLETKQIWVKKL----REVMQ---ETCFSGTSLTLPK 1594
Fly 1595 SPAKHSGSSQRSSRDLDEQLTENDHDRCSLASFGSGNTTDSDNKLGNQEATWVVADYIATSGSNE 1659
Fly 1660 LSV------------SKGQQVEIVEPPTAGEPDFCLVRLNPQHDDAAVQEGLVPVSVLKPPPGSH 1712
Fly 1713 KHGSGTAANAASSAGSQKSDMQDQSNRSKADALSSSTKRRGFSGRNWLPLMNRKGTDKPPSSKPL 1777
Fly 1778 VKKPSEKNLRTPQKHAE------ELAEQQNQQPGASPATVLPSSQFPSSTQHPGGAGAGDYEPDE 1836
Fly 1837 EVGLELPPPMK-PIQEPHLIANGPPAFAKDAKESSGNMASPGKMDGNPLSEIEEIVKTTTEQHES 1900
Fly 1901 NSRVDGGGGVENASTNGHGRSHDNNDESHTAVSDKAAALKKRQCVFAELMS 1951 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trio | NP_651960.2 | SEC14 | 13..152 | CDD:214706 | |
SPEC | 314..>468 | CDD:238103 | 31/156 (20%) | ||
SPEC | 563..778 | CDD:238103 | 38/229 (17%) | ||
SPEC | 782..997 | CDD:238103 | 44/227 (19%) | ||
SPEC | 897..1119 | CDD:238103 | 44/229 (19%) | ||
SPEC | 1125..1226 | CDD:197544 | 22/111 (20%) | ||
RhoGEF | 1287..1456 | CDD:279015 | 40/212 (19%) | ||
PH1_Kalirin_Trio_like | 1462..1584 | CDD:270060 | 33/195 (17%) | ||
PH | 1495..1580 | CDD:278594 | 21/146 (14%) | ||
SH3_Kalirin_1 | 1643..1707 | CDD:212786 | 16/75 (21%) | ||
RhoGEF | 1945..2122 | CDD:279015 | 3/7 (43%) | ||
PH2_Kalirin_Trio_p63RhoGEF | 2130..2260 | CDD:270061 | |||
Ccdc141 | NP_001020747.2 | SPEC | 132..356 | CDD:238103 | 59/375 (16%) |
sbcc | <219..790 | CDD:129705 | 138/728 (19%) | ||
SMC_prok_A | <712..999 | CDD:274009 | 75/402 (19%) | ||
I-set | 1410..1499 | CDD:369462 | 3/8 (38%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4240 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |