Sequence 1: | NP_651960.2 | Gene: | trio / 43974 | FlyBaseID: | FBgn0024277 | Length: | 2263 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001011359.1 | Gene: | sestd1 / 496826 | XenbaseID: | XB-GENE-977656 | Length: | 696 | Species: | Xenopus tropicalis |
Alignment Length: | 794 | Identity: | 177/794 - (22%) |
---|---|---|---|
Similarity: | 320/794 - (40%) | Gaps: | 164/794 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 LLTLLQERVVFLTGGRDRRGGPLLCFPATPRRDRLKPEDLRRLLSYLISIPSDAAKNLGFTVIID 73
Fly 74 MRGNGNCSTNVKTILKVLQEHFSANIHNVVIIKPDNFWQKQRASISSHKYK----FETTTVSIES 134
Fly 135 LNKIVESHQLTGDFEGQQLYDHQQWTDARLAIEDFFWQAGDMADRIDDLQEDLNRNDFAEDVPLA 199
Fly 200 RHAIDHHNEMRKKI--TKLPIEDLD---MQGKKLLAKINAMAPPGGQAPTNSGGPDMDSGPSSAG 259
Fly 260 QQSQPSQQSRSVGGNPDMSAAVNKALRQIELIHTGQEKLLMLWQHKKVKLDQCFQWRLFEQDCEK 324
Fly 325 MFDWILHNRDVFQMSYVEIGHNYSVAKSLQDEHQKFAVASMN---VSVNIDRILAVAARLIESQH 386
Fly 387 YAAQHIKTLAQRLDRTWKDFAAGLDERTAVLQLSVLFHHKAE-----------QYCNSVA--SWA 438
Fly 439 AACQASQPLPSDIQSLETAIRTHQSLYEAMCQAYTEVHSTSKKLLYQLDHLVQVCNQPPPPGVPD 503
Fly 504 HRKNSNNGSFNKYERQNPAADYSEGASHVLAVIHQILSHHRTLEAKWHQERLRLHQTLALRLFQE 568
Fly 569 DVKQVLDWLKNHGEVFLRKNTGIGRNFHKARVYQTSHDNFENVAQNTYSNAQKLLAAADELAR-- 631
Fly 632 ------SGEADP--NEIYSVARELELQVGSFAERVEQRRRRLDMAVIFYTHEKDVTAWIDKLRTD 688
Fly 689 VSTDETRLSQENLEGIERILQQYQRDQQESSVNVCLTTISQGEALLQEMR-SLEYADNT----GS 748
Fly 749 IAALEATLEKLNKQ 762 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trio | NP_651960.2 | SEC14 | 13..152 | CDD:214706 | 55/142 (39%) |
SPEC | 314..>468 | CDD:238103 | 38/169 (22%) | ||
SPEC | 563..778 | CDD:238103 | 45/215 (21%) | ||
SPEC | 782..997 | CDD:238103 | |||
SPEC | 897..1119 | CDD:238103 | |||
SPEC | 1125..1226 | CDD:197544 | |||
RhoGEF | 1287..1456 | CDD:279015 | |||
PH1_Kalirin_Trio_like | 1462..1584 | CDD:270060 | |||
PH | 1495..1580 | CDD:278594 | |||
SH3_Kalirin_1 | 1643..1707 | CDD:212786 | |||
RhoGEF | 1945..2122 | CDD:279015 | |||
PH2_Kalirin_Trio_p63RhoGEF | 2130..2260 | CDD:270061 | |||
sestd1 | NP_001011359.1 | CRAL_TRIO_2 | 28..153 | CDD:372686 | 47/128 (37%) |
Spectrin 1 | 272..378 | 23/113 (20%) | |||
SPEC | 273..478 | CDD:351773 | 45/249 (18%) | ||
Spectrin 2 | 381..494 | 23/149 (15%) | |||
SPEC | 421..605 | CDD:351773 | 44/230 (19%) | ||
Spectrin 3 | 500..602 | 27/111 (24%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 61 | 1.000 | Domainoid score | I10330 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |