DRSC/TRiP Functional Genomics Resources

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Protein Alignment trio and LOC4576783

DIOPT Version :10

Sequence 1:NP_651960.2 Gene:trio / 43974 FlyBaseID:FBgn0024277 Length:2263 Species:Drosophila melanogaster
Sequence 2:XP_061505953.1 Gene:LOC4576783 / 4576783 VectorBaseID:AGAMI1_013973 Length:1633 Species:Anopheles gambiae


Alignment Length:1462 Identity:330/1462 - (22%)
Similarity:572/1462 - (39%) Gaps:397/1462 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   506 KNSNNGSFNKYERQNPAADYSEGASHVLAVIHQILSHHRTLEAKWHQERLRLHQTLALRLFQEDV 570
            :..|..|..:...|:|||   :..::|:.:.||||....:.||....|...|.|. ..|:|:.. 
Mosquito   338 RQHNRPSMMRVINQSPAA---KKCANVIMMNHQILRKPLSAEAPELLESGGLKQE-NCRMFKLQ- 397

  Fly   571 KQVLDWLKNHGEVFLRKNTGIGRNFHKARVYQTSHDNFENVAQN-TYSNAQKLLAAADELARSGE 634
                   |:|....|........:.|:............|.|.| :.||.|...:..:|     .
Mosquito   398 -------KSHTSTNLLTRHKSMNDIHRINQLFLDCKGDSNPASNISLSNRQNCNSTTNE-----S 450

  Fly   635 ADPNEIYSVARELELQVGSFAERVEQRR----------RRLDMAVIFYTHEKDVT------AWID 683
            .||....::..:.|...|   .|.|:.|          :||...   |..|.::|      ..:.
Mosquito   451 CDPIRSNNMTADRETTTG---HRFEKHRKSEPNKYLVHKRLSAR---YKTESNLTNTNTTEVTLP 509

  Fly   684 KLRTD------VSTDET---RLSQ--------ENLEGIERILQQYQRDQQESSVNVCLTTISQGE 731
            .:..|      :|.|:|   |:.|        .:.||:::::::...:.|:..:         |:
Mosquito   510 PVSPDNGNSYGLSGDDTISKRIRQIIKGQDHIGSTEGVDQLVEKSMNEAQKHGI---------GK 565

  Fly   732 ALLQEMRSLEYADNTGSIAALEATLEKLNKQKVELEELWSARKFRADLILRLRYFERDARLLSVQ 796
            ...:|.:.::.........:...:.|||...:.::.:....::..:.......|  ::.:..:..
Mosquito   566 GKNEEQQQVQVCSKKFQRLSKSKSTEKLIMDRNQIGDAAEGKEKNSKTSSTCGY--KNCKFSNCP 628

  Fly   797 MEMWSEELQHADLSRDYQ-KAEQLIRMHNESV--TEIQNA-----TYEVVQQG------------ 841
            |...|.....:..|.... |....:...:|.|  |.|.|.     ..|::..|            
Mosquito   629 MSSSSSSSSASSTSSSVSCKTRARMEGGSEKVPSTAINNRPPPPDKLEIISNGKRTSIVSTDDGD 693

  Fly   842 -------------QDLL---QLFENAGF-ISMADATHTAQARIEYLLDFLRE------REIDLEE 883
                         :|.|   .|..::.| ..|.:||.|   .|:::.|..|.      ::||||.
Mosquito   694 MAKASKKESSACIKDQLVINNLLNSSTFNEKMNNATTT---DIKHMNDDSRVIITSKIKQIDLES 755

  Fly   884 MSEAKRAKLEQAVQLC-------QFQNDANQVISWIRNGEAMLVASFVTPNSLQEAEQLRKGHEQ 941
            .|......|.|:.|.|       :|.|..||     ||            ..|:...|.:...::
Mosquito   756 NSMIIEKSLAQSPQNCRISSSRHKFWNHQNQ-----RN------------IKLKNNPQTKAYDDK 803

  Fly   942 FQI--AIEKTHTSAVQVKYRADALINANHY----DPLSIDEISDDVTKKWQQLVTYAEERHKLVT 1000
            ..|  .|:....:::::...:....|.|..    :|:|:...:|            ..:|    :
Mosquito   804 IDINNKIKNEENNSIKIFISSSTGANGNSCNVLPEPVSLISTTD------------VGDR----S 852

  Fly  1001 ASINFYKTAEQVCSVLDSLEREYKREDDWCDGGGGS---DKAQ--AIV----QLISKHQEQKEAF 1056
            :|.::..|:.  |.   |...|..::|.:||....|   ||.|  :||    ..||.:.......
Mosquito   853 SSCSYASTSS--CG---STGSESDKDDGYCDQSECSTIPDKQQPSSIVSTSSSTISSNSSCSNGS 912

  Fly  1057 LKACTLA----------------------------RRTAETFLK-------YANRSQQCYQYKGN 1086
            ...|:.:                            |.|::|.::       :.||:     |...
Mosquito   913 STVCSESTHVSNVTCANSLPGGNGSATTITNSGGNRYTSKTSIRLGCDGSLFLNRN-----YLEE 972

  Fly  1087 CEG---HVKSKLDKLLTQENQVLDYWTLRK--KSLDQC-------QQFVLFERSAK--QAIEWIH 1137
            .||   .|.|.||. ...||...|:   |:  .:::.|       |.|.  .||::  .:|:..:
Mosquito   973 VEGPSSPVTSDLDG-DDNENASSDF---RECFNTVNVCCCAPKKPQTFA--HRSSRLVSSIDMTN 1031

  Fly  1138 --NTGEAYLSSRSNLVGISKEETEGLLKEHNEFRSTAKETRERVKLLIQLADSLVEKGHAHASDI 1200
              :||::.|:  .||...|.......|:..|...: ..||...||                    
Mosquito  1032 ASSTGKSALA--CNLFTASAATDNNALQSDNALHN-KNETCACVK-------------------- 1073

  Fly  1201 KQWVASVDQRYKDFSNRMDSYCEQLEKSLGMSQQQLLLGSDGNSSISSSSGDRHSDPTLEAKLNS 1265
                     ::::..|::::|..:.....|.....:.:.||  ::|:||..|          |||
Mosquito  1074 ---------KHRNSQNKIENYSSRPRSIEGPLDSGISISSD--TAITSSDSD----------LNS 1117

  Fly  1266 SNKENKEINEEKRKSARRKEFIMAELMQTERAYVNDLATCIKCFLEEF---RAGKSVPSALIGQE 1327
            .::  .:.:|.|.|    :..::|||::|||.||.::.:.:|.:.:|.   .....||..|.|:.
Mosquito  1118 QSQ--TDADERKLK----RGHVLAELLETERIYVAEMGSILKGYKDEMLSEEMSSLVPPGLQGKS 1176

  Fly  1328 DVIFGNIKEIHHFHQKIFLRELEKYETMPEDVGHCFVTWASK-FDMYVHYCKNKPTSNNL---LV 1388
            |::|||:.|::.||..|||::||...:..|.|..|||..... |.:|.:||:|.|.|..|   ||
Mosquito  1177 DILFGNLHELYTFHNDIFLKDLENCISTTELVALCFVQRRDTFFRLYSYYCQNIPRSERLRETLV 1241

  Fly  1389 Q-HGGSFFEELQRRLEVDHPLPAYLIKPVQRITKYQLLLKDLL-----SCCEESHGEIKEGLEVM 1447
            . |  .|.:|.|::|....||.|||:|||||||||||||||||     ..|..   |:::.|:.|
Mosquito  1242 DTH--LFLQECQKKLGHKLPLAAYLLKPVQRITKYQLLLKDLLKFSDTGTCSR---ELQKALDCM 1301

  Fly  1448 LNVPKKANDAMHLSLLENCDVSVDKLGEVVLQDAFQAW-DTKQIIR---KGRERRVFLFELYLLF 1508
            |.|.|..||:||...:......:.:.||:::||:||.| ::|:.:|   |.:.|.:||::..:||
Mosquito  1302 LVVLKCVNDSMHQIAITGFPADLSQQGELLMQDSFQVWTESKKDLRLRLKTQNRHIFLYQKAMLF 1366

  Fly  1509 AKEVKES--NVVKYQFKSKLMTTDMGITEHIEGDETKFAVW-TGRSPMLSDCRIVLKATSLETKQ 1570
            .|:..::  |...||||..|..:.:|:||.:.||..:|.|| .||..:.:     ::||::|.|.
Mosquito  1367 CKQGSKTGHNKSTYQFKHWLQMSQIGLTESVRGDSRRFEVWLQGRQEVHT-----IQATTIEIKN 1426

  Fly  1571 IWVKKLREVM--QETCFSG----------------TSLTLPK----SPAKHSGSSQRS------- 1606
            .||.:::.|:  |.....|                ||..:|:    :|.:...|.|:.       
Mosquito  1427 KWVAEIKRVLLNQLEELKGEKIKQYGLNHKPLRHMTSWDVPQAVQGTPNRILSSDQQPTLQANGI 1491

  Fly  1607 --------SRDLDEQLTENDHDRCSLASFGSGNTTDSDNKLGN----------QEATWV------ 1647
                    ::|:..::...:.|....|:..|.::::.||:..|          .|.|.|      
Mosquito  1492 GIGGMVGLAQDVVTRIAHMNDDSLLNATGISCSSSEHDNQESNAWSSDYSNSEDEFTTVEDSVVP 1556

  Fly  1648 ------VADYIATSGSNELSVSKGQQVEIVEPPTAGEPDFCLVRLNPQHDDAAVQEGLVPVSVLK 1706
                  :|||.| .|::|:|:.:.:.||:::...||   :..|::     .|...||..|.:.|:
Mosquito  1557 GHKFVSLADYCA-MGNSEVSMKEAEVVELLKVGCAG---WWFVKV-----IATGLEGWAPAAYLE 1612

  Fly  1707 PPPGSHKHGSGTAANAASSAGSQKSDMQDQSN 1738
            |           .|...|...|.:|  ||:.|
Mosquito  1613 P-----------VARKNSRLRSARS--QDRLN 1631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trioNP_651960.2 SEC14 13..152 CDD:214706
SPEC 314..>468 CDD:238103
SPEC 563..778 CDD:238103 39/248 (16%)
SPEC 782..997 CDD:238103 48/270 (18%)
SPEC 897..1119 CDD:238103 51/283 (18%)
SPEC 1125..1226 CDD:197544 17/104 (16%)
RhoGEF 1287..1455 CDD:459876 75/180 (42%)
PH1_Kalirin_Trio_like 1462..1584 CDD:270060 40/130 (31%)
SH3_Kalirin_1 1643..1707 CDD:212786 20/75 (27%)
RhoGEF 1945..2121 CDD:459876
PH2_Kalirin_Trio_p63RhoGEF 2130..2260 CDD:270061
LOC4576783XP_061505953.1 None
Blue background indicates that the domain is not in the aligned region.

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