Sequence 1: | NP_651960.2 | Gene: | trio / 43974 | FlyBaseID: | FBgn0024277 | Length: | 2263 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_610172.1 | Gene: | CG30440 / 35496 | FlyBaseID: | FBgn0050440 | Length: | 1057 | Species: | Drosophila melanogaster |
Alignment Length: | 1071 | Identity: | 266/1071 - (24%) |
---|---|---|---|
Similarity: | 427/1071 - (39%) | Gaps: | 289/1071 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 813 YQKAE-QLIRMHNESVTEIQNATYEVVQQGQDLLQLFENAGFISMADATHTAQARIE-YLLDFLR 875
Fly 876 EREIDLEEMSEAK-RAKLEQAVQLCQ-----------FQNDANQVISWIRNGEAMLVASFVTPNS 928
Fly 929 LQ---------EAEQLRKGHEQFQIAIEKTHTSAVQVK--------------------------- 957
Fly 958 --------YRADALINANHYDPLSIDEISDDVTKKWQQLVTYAEERHKLVTASINFYKTAEQVCS 1014
Fly 1015 VLDSLER--------------------EYKREDDWCDGGGGSDKAQAIVQL-ISKHQEQK----- 1053
Fly 1054 -----EAFLKACTLARRTAETFLKYANRSQQCYQYKGNCEGHVKSKLDKLLTQENQVL------- 1106
Fly 1107 ---DYWTLRKKSLDQCQQFVLFERSAKQAIEWIHNTGE----------------AYLSSRSNLVG 1152
Fly 1153 ISKEETEGLLK-----------EHNEFRSTAKETRERVKLLIQLADSL--VEKGHAHASDIKQWV 1204
Fly 1205 ASVDQRYKDFSNRM------------DSYCEQLEKSLG-------------------MSQQQLLL 1238
Fly 1239 G------------SDGNSSISSSSGDRHSDPTLEAKLNSSNKENKEINEEKRKSARRKEFIMAEL 1291
Fly 1292 MQTERAYVNDLATCIKCFLEEFRAGKSVPSALIGQEDVIFGNIKEIHHFHQKIFLRELEKYETMP 1356
Fly 1357 EDVGHCFVTWASKF-DMYVHYCKNKPTSNNL---LVQ-HGGSFFEELQRRLEVDHPLPAYLIKPV 1416
Fly 1417 QRITKYQLLLKDLL------SCCEESHGEIKEGLEVMLNVPKKANDAMHLSLLENCDVSVDKLGE 1475
Fly 1476 VVLQDAFQAW-DTKQIIR---KGRERRVFLFELYLLFAKEVKES--NVVKYQFKSKLMTTDMGIT 1534
Fly 1535 EHIEGDETKFAVW-TGRSPMLSDCRIVLKATSLETKQIWVKKLREVM--QETCFSGTSLTLPKSP 1596
Fly 1597 AKHSGSSQRSSRDLDE------------QLTENDHDRCSLASFGSGNTTDSDNKLGNQEATWVVA 1649
Fly 1650 DYIATSGSNELS-VSKGQQVEIVEPPTAGEP 1679 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trio | NP_651960.2 | SEC14 | 13..152 | CDD:214706 | |
SPEC | 314..>468 | CDD:238103 | |||
SPEC | 563..778 | CDD:238103 | |||
SPEC | 782..997 | CDD:238103 | 45/241 (19%) | ||
SPEC | 897..1119 | CDD:238103 | 53/317 (17%) | ||
SPEC | 1125..1226 | CDD:197544 | 31/141 (22%) | ||
RhoGEF | 1287..1456 | CDD:279015 | 78/179 (44%) | ||
PH1_Kalirin_Trio_like | 1462..1584 | CDD:270060 | 42/130 (32%) | ||
PH | 1495..1580 | CDD:278594 | 28/87 (32%) | ||
SH3_Kalirin_1 | 1643..1707 | CDD:212786 | 6/38 (16%) | ||
RhoGEF | 1945..2122 | CDD:279015 | |||
PH2_Kalirin_Trio_p63RhoGEF | 2130..2260 | CDD:270061 | |||
CG30440 | NP_610172.1 | RhoGEF | 622..796 | CDD:214619 | 78/179 (44%) |
PH-like | 802..925 | CDD:302622 | 41/127 (32%) | ||
PH | 829..922 | CDD:278594 | 32/97 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45462259 | |
Domainoid | 1 | 1.000 | 62 | 1.000 | Domainoid score | I2478 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0689 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR22826 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.840 |