Sequence 1: | NP_651960.2 | Gene: | trio / 43974 | FlyBaseID: | FBgn0024277 | Length: | 2263 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008771798.1 | Gene: | Mcf2 / 317598 | RGDID: | 1566098 | Length: | 1110 | Species: | Rattus norvegicus |
Alignment Length: | 1374 | Identity: | 302/1374 - (21%) |
---|---|---|---|
Similarity: | 511/1374 - (37%) | Gaps: | 406/1374 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 496 PPPPG-----------------------VPDHRK---NSNNGSFNKYERQNPAADYSEGASHVLA 534
Fly 535 VIHQILSHHRT-LEAKWHQERLRLHQTL-----ALRLFQEDVKQVLDWLKNHGEVFLRKNTGI-- 591
Fly 592 -GRNFHKARVYQTSHD-NFENVAQNTYSNAQKLLAAADELARSGEADPNEIYSVARELE----LQ 650
Fly 651 V------GSFAERVEQRRRRLDMAVIFYTHEKDVTAWIDKLRTDVSTDETRLSQENLEGIERILQ 709
Fly 710 QYQRDQQESSVNVCLTTISQGEALLQEMRSLEYADNTGSIAALEATLEKLNKQKVELEELWSARK 774
Fly 775 FRADLILR--LRYFERDARLLSVQMEMWSEELQHADLSRDYQKAEQLIRMHNESVTEIQNATYEV 837
Fly 838 VQQGQDLLQLFENAGFISMADATHTAQAR-------IEYLLDFLREREIDLEEMSEAKRAKLEQA 895
Fly 896 VQLCQFQNDANQVISWIRNGEAML----VASFVTPNSLQEAEQLRK------------------- 937
Fly 938 --GHEQFQIAIEKTHTSAV--------QVKYRADALINANHYDPLSIDEISDDVTKKWQQLVTYA 992
Fly 993 EERHKLVTASINFYKTAEQVCSVLDSLEREYKREDDWCDGG------GGSDKAQAIVQLISKHQE 1051
Fly 1052 QKEAFLKACTLARRTAETFLKYA----NRSQQCYQYKGNCEGHVKSKLDKLLTQENQVLDYWTLR 1112
Fly 1113 KKSLDQCQQFVLFERSAKQAIEWIHNTGEAYLSSRSNLVGISKEETEGLLKEHNEFRSTAKETRE 1177
Fly 1178 RVKLLIQLADSLVEKGHAHASDIKQWVASVDQRYKDFSNRMDSYCEQLEKSLGMSQQQLLLGSDG 1242
Fly 1243 NSSISSSSGDRHSD--PTLEAKLNSSNKENKEINEEKRKSARRKEFIMAELMQTERAYVNDLATC 1305
Fly 1306 IKCFLEEF---RAGKSVPSALIGQEDVIFGNIKEIHHFHQKIFLRELEKYETMPEDVGHCFVTWA 1367
Fly 1368 SKFDMYVHYCKNKPTSNNLLVQHGG-SFFEELQRRLEVDHPLPAYLIKPVQRITKYQLLLKDLLS 1431
Fly 1432 CCEESHG--EIKEGLEVMLNVPKKANDAMHLSLLENCDVSVDKLGEVVLQDAFQAW--------D 1486
Fly 1487 TKQIIR-KGRERRVFLFELYLLFAKEVKES-----NVVKYQFKSKLMTTDMGITEHIEGDETKFA 1545
Fly 1546 VWTGRSPMLSDCRIVLKATSLETKQIWVKKLREVM---QETCFSGTSLTLPKSPAKHSGSSQRSS 1607
Fly 1608 RDLDEQLTENDHDRCSLASFGSGNTTDSDNKLGNQEATWVVADYIATSGSNELSVSKGQQVEIVE 1672
Fly 1673 PPTAGEPDFCLVRLNPQHDDAAVQEGLVPVSVLKPPPGSHKHGSGTAANAASSAGSQKSDMQDQS 1737
Fly 1738 NRSKADALS 1746 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trio | NP_651960.2 | SEC14 | 13..152 | CDD:214706 | |
SPEC | 314..>468 | CDD:238103 | |||
SPEC | 563..778 | CDD:238103 | 40/228 (18%) | ||
SPEC | 782..997 | CDD:238103 | 44/256 (17%) | ||
SPEC | 897..1119 | CDD:238103 | 47/264 (18%) | ||
SPEC | 1125..1226 | CDD:197544 | 19/100 (19%) | ||
RhoGEF | 1287..1456 | CDD:279015 | 75/174 (43%) | ||
PH1_Kalirin_Trio_like | 1462..1584 | CDD:270060 | 40/138 (29%) | ||
PH | 1495..1580 | CDD:278594 | 28/89 (31%) | ||
SH3_Kalirin_1 | 1643..1707 | CDD:212786 | 11/63 (17%) | ||
RhoGEF | 1945..2122 | CDD:279015 | |||
PH2_Kalirin_Trio_p63RhoGEF | 2130..2260 | CDD:270061 | |||
Mcf2 | XP_008771798.1 | SEC14 | 119..259 | CDD:214706 | 31/180 (17%) |
SPEC | 399..590 | CDD:295325 | 47/285 (16%) | ||
RhoGEF | 685..862 | CDD:238091 | 76/176 (43%) | ||
PH-like | 869..1000 | CDD:302622 | 38/134 (28%) | ||
PH | 884..997 | CDD:278594 | 36/116 (31%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4240 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |