Sequence 1: | NP_651960.2 | Gene: | trio / 43974 | FlyBaseID: | FBgn0024277 | Length: | 2263 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038954139.1 | Gene: | Plekhg4 / 307796 | RGDID: | 1310790 | Length: | 1231 | Species: | Rattus norvegicus |
Alignment Length: | 1208 | Identity: | 257/1208 - (21%) |
---|---|---|---|
Similarity: | 428/1208 - (35%) | Gaps: | 372/1208 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 629 LARSGEADPNEIYSV----ARELELQVGSFAERVEQRRRRL----DMAV-------IFYTHEKDV 678
Fly 679 TAWID-KLRTDVSTDETRLSQENLEGIERILQQYQRDQQESSVNVCLTTISQGEALLQ---EMRS 739
Fly 740 LEYADNTGSI-----------AAL----EATLEKLNKQKVELEELWSARKFRADLILR----LRY 785
Fly 786 FERDARLLSVQMEMWSEELQHADLSRDYQKAEQLIRMHNESVTEIQNATYEVVQQGQDLLQLFEN 850
Fly 851 AGFISMADATHTAQARIEYLLDFLREREIDLEEMSEAKRAKLEQAVQLCQFQNDANQVISWIRNG 915
Fly 916 EAMLVASFVTPNSLQEAEQLRKGHEQFQIAIEKTHTSAVQVKYRADALINANHYDPLSIDEISDD 980
Fly 981 VTKKWQQLVTYAEERHKLVTASINFYKTAEQVCSVLDSLEREYKREDDWCDGGGGSDKAQAIVQL 1045
Fly 1046 ISKHQEQKEA-FLKACTLARRTAETFLKYANRSQQCYQYKGNCEGHVKSKLDKLLTQENQVLDYW 1109
Fly 1110 TLRKKSLDQCQQFVLFERSAKQAIEWIHNTGEAYLSSRSNLVGISKEETEGLLKEHNEFRSTAKE 1174
Fly 1175 TRERVKLLIQLADSLVEKGHAHASDIKQWVASVDQRYKDFSNRMDSYCEQLEKSLGMSQQQLLLG 1239
Fly 1240 SDGNSSISSSSGDRHSDPTLEAKLNSSNKENKEINEEKRKSARRKEFIMAELMQTERAYVNDLAT 1304
Fly 1305 CIKCFLEEFRAGKSVPSALIGQEDVIFGNIKEIHHFHQKIFLRELEKYETMPEDVGHCFVTWASK 1369
Fly 1370 FDMYVHYCKNKPTSNNLLVQHGGSFFEELQRRLEVDH-PLPAYLIKPVQRITKYQLLLKDLLSCC 1433
Fly 1434 ---EESHGEIKEGLEVMLNVPKKANDAMHLSLLENCDVSVDKLGEVVLQDAFQAWDTKQIIRKGR 1495
Fly 1496 E---RRVFLFELYLLFAKEVK-ESNVVKYQFKSKLMTTDMGITEHIEGDETKFAVWTGRSPMLSD 1556
Fly 1557 CRIVLKATSLETKQIWVKKLREVMQETCFSGTSLTLPKSPAKHSGSSQRSSRDLDEQLTENDHDR 1621
Fly 1622 -CSLASFGSGNTTDSDNKLGNQEATWVVA-DYIATSGSNELSVSKGQQVE-----IVEP------ 1673
Fly 1674 ------PTAGEPDFCLV----RLNPQHDDA--AVQEGLVPVSV-----------LKPPPGSHKHG 1715
Fly 1716 SGTAANAASSAGSQKSDMQDQSNRSKADALSSSTKRRG 1753 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trio | NP_651960.2 | SEC14 | 13..152 | CDD:214706 | |
SPEC | 314..>468 | CDD:238103 | |||
SPEC | 563..778 | CDD:238103 | 31/182 (17%) | ||
SPEC | 782..997 | CDD:238103 | 35/218 (16%) | ||
SPEC | 897..1119 | CDD:238103 | 32/222 (14%) | ||
SPEC | 1125..1226 | CDD:197544 | 14/100 (14%) | ||
RhoGEF | 1287..1456 | CDD:279015 | 63/172 (37%) | ||
PH1_Kalirin_Trio_like | 1462..1584 | CDD:270060 | 37/125 (30%) | ||
PH | 1495..1580 | CDD:278594 | 27/88 (31%) | ||
SH3_Kalirin_1 | 1643..1707 | CDD:212786 | 20/98 (20%) | ||
RhoGEF | 1945..2122 | CDD:279015 | |||
PH2_Kalirin_Trio_p63RhoGEF | 2130..2260 | CDD:270061 | |||
Plekhg4 | XP_038954139.1 | SPEC | 463..>614 | CDD:413338 | 41/270 (15%) |
RhoGEF | 749..915 | CDD:238091 | 63/167 (38%) | ||
PH_puratrophin-1 | 915..1050 | CDD:270062 | 43/173 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |