Sequence 1: | NP_651960.2 | Gene: | trio / 43974 | FlyBaseID: | FBgn0024277 | Length: | 2263 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_016856538.1 | Gene: | ARHGEF16 / 27237 | HGNCID: | 15515 | Length: | 726 | Species: | Homo sapiens |
Alignment Length: | 816 | Identity: | 158/816 - (19%) |
---|---|---|---|
Similarity: | 287/816 - (35%) | Gaps: | 294/816 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 1586 SGTSLTLPKSPA-KHSGSSQRSSRDLDEQLTENDHDRCSLASFGSGNTTDSDNKLGNQEATWVVA 1649
Fly 1650 DYIATSGSNELSVSKGQQVEIVEPPTAGEPDFCLVRLNPQ-HDDAAVQEGLVPVSVLKPPPGSHK 1713
Fly 1714 HGS---GTAANAASSAGSQKSDMQDQSNRSKAD-----------ALSSSTKRR------------ 1752
Fly 1753 ----------GFSGRNWLPLMNR------KGTDKP----------PSSKPLVKKPSEKNLRTPQK 1791
Fly 1792 HAEELAEQQNQQPGASPATVLPSSQFPSSTQHPGGAGAGDYEPDEEVGLELPPPMKPIQEPHLIA 1856
Fly 1857 NGPPAFAKDAKESSGNMASPGKMDGNPL-----------SEIEEIVKTTTEQHESNSRVDGGGGV 1910
Fly 1911 ENASTNGHGRSHDNNDESHTAVSDKAAALKKRQCVFAELMSTEEAYVQDLHEIVNGYMTEINNTN 1975
Fly 1976 SDIPMPEDLKGGKMKL----VFNNIKDIYEWHRDFF--LRALRNCQKSPADLGPLIKRSATK-FA 2033
Fly 2034 LYYTYCSNKPLS----EYIVSAHYQYFDSIRQKLGHR-----LDLSNLIIKPVQRITKYELLIKE 2089
Fly 2090 IIKATEG-AGLYKEVPMLQEAYQQMKVVVKTVN------------DMMVVLRSLQDFDGE----- 2136
Fly 2137 ITAQGSLLMQGPMNCVVDAAQKHREL------QVFLFQQIIIFADIEKTKNQYASPIFKYRSHIQ 2195
Fly 2196 LNHMQMKEL----GDCR-------FQI---RSTDPKIPEMTIICQAASQ---------ENYAGWR 2237
Fly 2238 DMLNK-------------------ILQQQNDLIFML 2254 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trio | NP_651960.2 | SEC14 | 13..152 | CDD:214706 | |
SPEC | 314..>468 | CDD:238103 | |||
SPEC | 563..778 | CDD:238103 | |||
SPEC | 782..997 | CDD:238103 | |||
SPEC | 897..1119 | CDD:238103 | |||
SPEC | 1125..1226 | CDD:197544 | |||
RhoGEF | 1287..1456 | CDD:279015 | |||
PH1_Kalirin_Trio_like | 1462..1584 | CDD:270060 | |||
PH | 1495..1580 | CDD:278594 | |||
SH3_Kalirin_1 | 1643..1707 | CDD:212786 | 15/64 (23%) | ||
RhoGEF | 1945..2122 | CDD:279015 | 42/205 (20%) | ||
PH2_Kalirin_Trio_p63RhoGEF | 2130..2260 | CDD:270061 | 32/178 (18%) | ||
ARHGEF16 | XP_016856538.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3601 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.940 |