| Sequence 1: | NP_651960.2 | Gene: | trio / 43974 | FlyBaseID: | FBgn0024277 | Length: | 2263 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_594853.1 | Gene: | rgf2 / 2542953 | PomBaseID: | SPAC1006.06 | Length: | 1158 | Species: | Schizosaccharomyces pombe |
| Alignment Length: | 595 | Identity: | 121/595 - (20%) |
|---|---|---|---|
| Similarity: | 217/595 - (36%) | Gaps: | 158/595 - (26%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1035 GSDKAQAIVQLISKHQEQKE--------AFLKACTLARRTAETFLKYANRSQQCYQYKGNCEGHV 1091
Fly 1092 KSKLDKLL-----TQENQVLDYWTLRKKSLDQCQQF--VLFERSAKQAIEWIHNTGEAYLSSRSN 1149
Fly 1150 LVGISKEETEGLLKEHN------------EFRSTAKETRE--------RVKLLIQLADSL--VEK 1192
Fly 1193 ----------GHAHASDIKQWVASVDQRYKDFSNRMDSYCEQLEKSLGMSQQQLL------LGSD 1241
Fly 1242 GNSSISSSSGDRHSDPTLEAKLNSSNKENKEINEEKRKSARRKEFIMAELMQTERAYVNDLATCI 1306
Fly 1307 KCFLEEFRAGKSVPSALIGQED------VIFGNIKEIHHFHQKI--FLRELEKYETMPEDVGHCF 1363
Fly 1364 VTWASKFDMYVHYCKN-----------KPTSNNLLVQHGGSFFEELQ-----RRLEVDHPLPAYL 1412
Fly 1413 IKPVQRITKYQLLLKDLLSCCEESHGE----------IKEGL-EVMLNVPKKANDAMHLSLLENC 1466
Fly 1467 DVSVDKLGEVVLQDAFQAWDTKQIIRKG---------------RERRVFLFELYLLFAKEVKESN 1516
Fly 1517 VVKYQFKSKL 1526 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| trio | NP_651960.2 | SEC14 | 13..152 | CDD:214706 | |
| SPEC | 314..>468 | CDD:238103 | |||
| SPEC | 563..778 | CDD:238103 | |||
| SPEC | 782..997 | CDD:238103 | |||
| SPEC | 897..1119 | CDD:238103 | 23/96 (24%) | ||
| SPEC | 1125..1226 | CDD:197544 | 20/132 (15%) | ||
| RhoGEF | 1287..1456 | CDD:279015 | 45/203 (22%) | ||
| PH1_Kalirin_Trio_like | 1462..1584 | CDD:270060 | 16/80 (20%) | ||
| PH | 1495..1580 | CDD:278594 | 8/32 (25%) | ||
| SH3_Kalirin_1 | 1643..1707 | CDD:212786 | |||
| RhoGEF | 1945..2122 | CDD:279015 | |||
| PH2_Kalirin_Trio_p63RhoGEF | 2130..2260 | CDD:270061 | |||
| rgf2 | NP_594853.1 | ROM1 | 1..1148 | CDD:227709 | 121/595 (20%) |
| DEP_fRom2 | 204..285 | CDD:239882 | 18/93 (19%) | ||
| RhoGEF | 451..632 | CDD:279015 | 44/195 (23%) | ||
| PH_5 | 670..802 | CDD:292048 | 11/52 (21%) | ||
| CNH | 831..1117 | CDD:279162 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3601 |
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.030 | |||||