DRSC/TRiP Functional Genomics Resources

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Protein Alignment trio and Tiam2

DIOPT Version :10

Sequence 1:NP_651960.2 Gene:trio / 43974 FlyBaseID:FBgn0024277 Length:2263 Species:Drosophila melanogaster
Sequence 2:NP_036008.2 Gene:Tiam2 / 24001 MGIID:1344338 Length:1715 Species:Mus musculus


Alignment Length:1813 Identity:335/1813 - (18%)
Similarity:588/1813 - (32%) Gaps:669/1813 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 NRNDFAEDVPLARHAIDHHNEMRKKITKLP-------IEDLDMQGKK--LLAKINAMAPPGG--- 240
            ||..||.|:.:... :||.:.:......||       .||   ..||  |.|::...:...|   
Mouse   329 NRVSFASDMDVPSR-VDHRDPLHYSSFTLPCRKSKALTED---AAKKDTLKARMRRFSDWTGSLS 389

  Fly   241 ------QAPTNSGGPD-MDSGPSSAGQQSQPSQQSRSVGGNPDMSAAVNKALRQIELIHTGQEKL 298
                  |.|.:..|.: .||.......:.|...|:.|                            
Mouse   390 RKKRKLQEPRSMEGSEYFDSHSDGLNAEGQVPAQTSS---------------------------- 426

  Fly   299 LMLWQHKKVKLDQCFQWRLFEQDCEKMFDWILHNRDVFQMSYVEIGHNYSVAKSLQDEHQKFAVA 363
             :||.....:                    .|.:|.       |..|..||....|:.::.|   
Mouse   427 -LLWSGGSAQ--------------------TLPHRS-------ESTHAISVDPLRQNIYENF--- 460

  Fly   364 SMNVSVNIDRILAVAARLIESQHYAAQHIKTLAQRLDRTWKDFAAGLDERTAVLQLSVLFHHKAE 428
                           .|.:|......:|::|..:.::       :..:..:::.||.:||  :.|
Mouse   461 ---------------MRELEMSRSNTEHVETSTETME-------SSSESVSSLEQLDLLF--EKE 501

  Fly   429 QYCNSVASWAAACQASQPLPS--DIQSLETAIRTHQS------------LYEAMCQAYTEVHSTS 479
            |.....|.|.    ..:||.:  ..:.||...|....            .||...:..||.:|..
Mouse   502 QGVVRKAGWL----FFKPLVTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAP 562

  Fly   480 KKLLYQLDHLVQVCNQPPPPGVPDHRKNSNNGSFNKYERQNPAADYSEGASHVLAVIHQILSHHR 544
            :..|:..|.:||        .||:|.|.                      .||..:.:..     
Mouse   563 RCALFAEDSIVQ--------SVPEHPKK----------------------EHVFCLSNSC----- 592

  Fly   545 TLEAKWHQERLRLHQTLALRLFQEDVKQVLDWLKNHGEVFLRKNTGIGRNFHKARVYQ-TSHDNF 608
                                                |:|:|               :| ||..:.
Mouse   593 ------------------------------------GDVYL---------------FQATSQTDL 606

  Fly   609 ENVAQNTYSNAQKLLAAADELARSGEADPNEIYSVARELELQVGSFAERVEQRRRRLDMAVIFYT 673
            ||.....:|....|.|     .:.|:.|      ..|.|:.|..|..::::...:...||     
Mouse   607 ENWVTAIHSACASLFA-----KKHGKED------TVRLLKSQTRSLLQKIDMDSKMKKMA----- 655

  Fly   674 HEKDVTAWIDKLRTDVSTDETRLSQENLEGIERILQQYQRDQQESSVNV----C-LTTISQGEAL 733
                      :|:..|.:|     .:|.:.||..::|::::.::..:::    | |.::..||  
Mouse   656 ----------ELQLSVVSD-----PKNRKAIENQIRQWEQNLEKFHMDLFRMRCYLASLQGGE-- 703

  Fly   734 LQEMRSLEYADNTGSIAAL-------------------EATLEK----LNKQKVELEELWSARKF 775
            |...:||..|.:..|..||                   ::||.|    |.::....:.::|:.|.
Mouse   704 LPNPKSLLAATSRPSKLALGRLGVLSVSSFHALVCSRDDSTLRKRTLSLTQRGKSKKGIFSSLKG 768

  Fly   776 RADLILRLRYFERDARLLSVQMEMWSEELQHADL-------SRDYQKAEQLIRMHNESV-TEIQN 832
            ...|..:.|  |:.|.:    .:|:.....|..|       |.:..||..| .::..:| :.:::
Mouse   769 LDTLARKGR--EKRASI----TQMFDSSHSHGFLGTQLPQKSTNSNKAHDL-HLYGSAVDSALRD 826

  Fly   833 ATYEVVQQGQDLLQLFENAGFISMADATHTAQARIEYLLDFL-REREIDLEEMSEAKRAKLEQAV 896
            :.:||    |..:...:|.|    ...|...:.|:|.:|..: :.|:::........|..::::|
Mouse   827 SMWEV----QTYVHFQDNEG----VTVTIKPEHRVEDVLALVCKMRQLEPTHYGLQLRKVVDKSV 883

  Fly   897 QLC---QFQNDANQVISWIRNGEAMLVASFVTPNSLQEAEQLRKGH-EQFQIAIEKTHTSAVQVK 957
            :.|   .::....||...|.          |.|.|:.:.:..:.|. ..|..|:      .|||.
Mouse   884 EWCVPALYEYMQEQVYDEIE----------VFPLSVYDVQLTKTGDMTDFGFAV------TVQVD 932

  Fly   958 YRADALINANHYDPLSIDEISDDVTKKWQQLVTYAEERHKLVTASINFYKTAEQVCSVLDSLERE 1022
                   ...|.:.:.|.::..|                     |:.:                 
Mouse   933 -------EHQHLNRIFISDVLPD---------------------SLAY----------------- 952

  Fly  1023 YKREDDWCDGGGGSDKAQAIVQLISK-----HQEQKEAFLK----ACTLARRTAETFLKYANRSQ 1078
                      |||..|...|..|..:     ..:|.||...    ..||..|...|      |..
Mouse   953 ----------GGGLRKGNEITSLNGEPVSDLDIQQMEALFSEKSVGLTLVARPVTT------RRT 1001

  Fly  1079 QCYQYKGNCEGHVKSKLDKLLTQENQVLDYWTLRKKSLDQC-QQFVLFERSAKQAIEWIHNTGEA 1142
            .|..:..:                    |.::..:|||... .|..|.|       |::.|..:.
Mouse  1002 LCASWSDS--------------------DLFSRDQKSLPPSPNQSQLLE-------EFLDNFRKT 1039

  Fly  1143 YLSSRSNL----VGISKEETEGLLKE--HNEFRSTAKETRERVKLLIQLADSLVEKGHAHASDIK 1201
            ..|..||:    .|:.:.:|||.|.:  |          ||:::.....||.:.|          
Mouse  1040 ATSDFSNVPEITTGLKRSQTEGTLDQVPH----------REKMEQTFLSADQIAE---------- 1084

  Fly  1202 QWVASVDQRYKDFSNRMDSYCEQLEKSLGMSQQQLLLGSDGNSSISSSSGDRHSDPTLEAKLNSS 1266
                               .|..|..:                         |:: ::||...|.
Mouse  1085 -------------------LCRDLNNT-------------------------HTN-SMEAPTESH 1104

  Fly  1267 NKENKEINEEKRKSARRKEFIMAELMQTERAYVNDLATCIKCFLEEFRAGKSVPSALIGQEDV-- 1329
            :...:.:......:.|.:: ::.||:.||::||.||:...:.:||..:     ....:.|:::  
Mouse  1105 DPPPRPLARHLSDADRLRK-VIQELVDTEKSYVKDLSCLFELYLEPLQ-----NETFLTQDEMES 1163

  Fly  1330 IFGNIKEIHHFHQKIFLRELE----------------KYETMPEDVGHCFVTWASKFDMYVHYCK 1378
            :||::.|:..| ||:||..||                ::..:...:|..|:.:|..|.:|..:| 
Mouse  1164 LFGSLPEMLEF-QKVFLETLEDAISASSDFSVLETPSQFRKLLFSLGGSFLYYADHFKLYSGFC- 1226

  Fly  1379 NKPTSNNLLVQHGGSFFEELQRR---------LEVDHP-------LPAYLIKPVQRITKYQLLLK 1427
                :|::.||      ..|:|.         |:..:|       |.:||||||||:.||.||||
Mouse  1227 ----ANHIKVQ------RVLERAKTDKAFKAFLDARNPTKQHSSTLESYLIKPVQRVLKYPLLLK 1281

  Fly  1428 DLLSCCE---ESHGEIKEGLEVMLNVPKKANDAMHLSLLENCDVSVDKL---------------- 1473
            :|:|..:   |.|..:.|.|:.|..|....|:..  .:.|:..:..|:|                
Mouse  1282 ELVSLTDHESEEHYHLTEALKAMEKVASHINEMQ--KIYEDYGMVFDQLVAEQSGTEKEVTELSM 1344

  Fly  1474 GEVVLQDAFQAWDTKQI----IRKGRERRVFLFE--LYLLFAKEVK--------------ESNVV 1518
            ||:::.... :|....:    .||..|..||:|:  :.|::.:..|              .:::.
Mouse  1345 GELLMHSTV-SWLNPFLSLGKARKDIELTVFVFKRAVILVYKENCKLKKKLPSNSRPAHNSADLD 1408

  Fly  1519 KYQFK----SKLMTTDMGITEHIEGDETKFAVWT-----GRSPMLSDCRIVLKATSLETKQIWVK 1574
            .::|:    ...:...:|.|...|.:.|...:.|     ||...:    ..|..:..|.|...||
Mouse  1409 PFKFRWLIPISALQVRLGNTAGTENNSTWELIHTKSEIEGRPETI----FQLCCSDSENKTSIVK 1469

  Fly  1575 KLREVMQET------CFSGTSLTLPKS------PAKHS---GSSQRSSRDLDEQLTENDHDRCSL 1624
            .:|.:::|.      |    .|.|.|:      |.|:.   .:...|||.|....|.:..:..|.
Mouse  1470 VIRSILRENFRRHIKC----ELPLEKTCKDRLVPLKNRVPVSAKLASSRSLKGLRTSSSSEWPSE 1530

  Fly  1625 ASFGSGNTTDSDN---KLGNQEATWVVADYIATSGSNELSVSKGQQVEIVE-------------- 1672
            .|  .||:.|||.   ..|.|.:...||:....|.|.||  .|..|..:.|              
Mouse  1531 PS--KGNSLDSDECSLSSGTQSSGCPVAESRRDSKSTEL--EKDAQEGLAEFPDGLIKESDILSD 1591

  Fly  1673 -------PPTAGEP------DFCLVRLNPQHD------DAAVQEGLVPVSV------LKPPPGSH 1712
                   |...|.|      .|..::::.:.|      ....:.|..|..|      :|....|.
Mouse  1592 EDEDFHHPLKQGSPTKDIEIQFQRLKISEESDVHPVGQQPLTESGEQPKLVRGHFCPIKRKANST 1656

  Fly  1713 KHGSGTAANAASSAGSQKSDMQDQSNRSKADALS---SSTKRRGFSGRNWLPLMNRKG 1767
            |.|.||..         |:..:.||..|..:..|   :....|.||.::...::|.:|
Mouse  1657 KRGRGTLL---------KAQTRHQSLDSHPETASIDLNLVLEREFSVQSLTSVVNEEG 1705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trioNP_651960.2 SEC14 13..152 CDD:214706
SPEC 314..>468 CDD:238103 27/167 (16%)
SPEC 563..778 CDD:238103 43/243 (18%)
SPEC 782..997 CDD:238103 39/227 (17%)
SPEC 897..1119 CDD:238103 36/234 (15%)
SPEC 1125..1226 CDD:197544 18/106 (17%)
RhoGEF 1287..1455 CDD:459876 57/204 (28%)
PH1_Kalirin_Trio_like 1462..1584 CDD:270060 29/172 (17%)
SH3_Kalirin_1 1643..1707 CDD:212786 17/102 (17%)
RhoGEF 1945..2121 CDD:459876
PH2_Kalirin_Trio_p63RhoGEF 2130..2260 CDD:270061
Tiam2NP_036008.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..249
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 263..294
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 385..418 6/32 (19%)
PH1_Tiam1_2 503..629 CDD:269937 34/220 (15%)
Tiam_CC_Ex 643..740 CDD:408184 20/118 (17%)
RBD 832..902 CDD:128731 13/73 (18%)
PDZ_canonical 911..994 CDD:467153 21/143 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1092..1113 4/46 (9%)
RhoGEF 1124..1313 CDD:214619 57/205 (28%)
PH2_Tiam1_2 1315..1487 CDD:269957 30/182 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1515..1582 20/70 (29%)
Blue background indicates that the domain is not in the aligned region.

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