| Sequence 1: | NP_651960.2 | Gene: | trio / 43974 | FlyBaseID: | FBgn0024277 | Length: | 2263 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_011248543.1 | Gene: | Arhgef16 / 230972 | MGIID: | 2446219 | Length: | 721 | Species: | Mus musculus |
| Alignment Length: | 731 | Identity: | 142/731 - (19%) |
|---|---|---|---|
| Similarity: | 263/731 - (35%) | Gaps: | 230/731 - (31%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1686 LNPQHDDAAVQEGLV---------------PV-------SVLK---------------PPPGSHK 1713
Fly 1714 HGS-------GTAANAASSAGSQKSDMQDQSNRSKADALSSSTKRRGFSGRNWLPLMNRKGTDKP 1771
Fly 1772 PSSKPLVKKPS----------------EKNLRTPQKHAEELAEQQNQQPGASPATVLPSSQFPSS 1820
Fly 1821 TQHPGGAGAGDYEPDEEVGLELPPPMKPIQEPHLIANGPPAF--AKDAKESSGNMASPGKMDGNP 1883
Fly 1884 --LSEIEEIVKTTTEQHESNSRV----DGGGGVENASTNGHGRSH--------DNNDESHTAVSD 1934
Fly 1935 K-AAALKKRQCVFAELMSTEEAYVQDLHEIVNGYM--TEINNTNSDIPMPEDLKGGKMKLVFNNI 1996
Fly 1997 KDIYEWHRDFF--LRALRNCQKSPADLGPLIKRSAT-KFALYYTYCSNKPLSEYI---VSAHYQY 2055
Fly 2056 FDSIRQKLGHR-----LDLSNLIIKPVQRITKYELLIKEIIKATEG-AGLYKEVPMLQEAYQQMK 2114
Fly 2115 VVVKTV------------NDMMVVLRSLQDFDGE------ITAQGSLLMQGPMNCVVDAAQKHRE 2161
Fly 2162 L------QVFLFQQIIIFADIEKTKNQYASPIFKYRSHIQLNHMQMKEL---------GDCR--- 2208
Fly 2209 ----FQI---RSTDPKIPEMTIICQAASQE---------NYAGWRDMLNK--------------- 2242
Fly 2243 ----ILQQQNDLIFML 2254 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| trio | NP_651960.2 | SEC14 | 13..152 | CDD:214706 | |
| SPEC | 314..>468 | CDD:238103 | |||
| SPEC | 563..778 | CDD:238103 | |||
| SPEC | 782..997 | CDD:238103 | |||
| SPEC | 897..1119 | CDD:238103 | |||
| SPEC | 1125..1226 | CDD:197544 | |||
| RhoGEF | 1287..1456 | CDD:279015 | |||
| PH1_Kalirin_Trio_like | 1462..1584 | CDD:270060 | |||
| PH | 1495..1580 | CDD:278594 | |||
| SH3_Kalirin_1 | 1643..1707 | CDD:212786 | 8/57 (14%) | ||
| RhoGEF | 1945..2122 | CDD:279015 | 43/202 (21%) | ||
| PH2_Kalirin_Trio_p63RhoGEF | 2130..2260 | CDD:270061 | 33/184 (18%) | ||
| Arhgef16 | XP_011248543.1 | RhoGEF | 300..478 | CDD:366202 | 43/192 (22%) |
| PH_ephexin | 501..634 | CDD:269929 | 22/139 (16%) | ||
| SH3_ARHGEF16_26 | 645..696 | CDD:212871 | 5/27 (19%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3601 |
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.940 | |||||