DRSC/TRiP Functional Genomics Resources

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Protein Alignment trio and D630003M21Rik

DIOPT Version :10

Sequence 1:NP_651960.2 Gene:trio / 43974 FlyBaseID:FBgn0024277 Length:2263 Species:Drosophila melanogaster
Sequence 2:NP_808325.2 Gene:D630003M21Rik / 228846 MGIID:3606579 Length:1187 Species:Mus musculus


Alignment Length:772 Identity:145/772 - (18%)
Similarity:262/772 - (33%) Gaps:222/772 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLQERVVFLTGGRDRRGGPLLCFPATPRRDRLK-----PEDLRRLLSYLISIPSDAAKNLGFTVI 71
            |||..:..|.||||:.|.|||.  .:...|..:     ..::..|||||.|:|....|..|..|:
Mouse   567 LLQSGIACLPGGRDKVGRPLLL--VSTAEDAWEAPWCTTSEVAELLSYLCSVPRLEDKAKGLLVV 629

  Fly    72 IDMRGNGNCSTNVKTILKVLQEHFSANIHNVVIIKPDNFWQKQRASI---SSHKYKFETTTVSIE 133
            ||.| .|.....:.:.|:.:|....|::..|:::       .::|||   |....:.|..| |::
Mouse   630 IDAR-KGTQRPGLVSALQGIQALAPASVSKVLLL-------GEKASIPQLSVLPAQVEVLT-SLK 685

  Fly   134 SLNKIVESHQLTGDFEGQQLYDHQQWTDARLAIEDFFWQAGDMADRIDDLQEDLNRNDFAEDVPL 198
            :|...|:..||....||...|.|.:|......::.|.......:..:....::..:.:....|..
Mouse   686 ALRNHVDPSQLPEALEGPFPYHHSEWVQFFQKLDPFLTDLRQASSLLQASIQEFEKGEPPGGVQE 750

  Fly   199 ARHAIDHHNEMRKKITKLP-IEDLDMQGKKLLAKINAMAPPGGQAPTNSGGPDMDSGPSSAGQQS 262
            |...:....|:.:.:.:.| :..|..:|...||.:...|         ||   :::.|......:
Mouse   751 ATRCLSKSKELMETVLRDPGLLALQREGGTTLASLQQEA---------SG---LNANPDVRSHLT 803

  Fly   263 QPSQQSRSVGGN-PDMSAAVNKALRQIELIHTGQEKLLMLWQHKKVKLDQCFQWRLFEQDCEKMF 326
            :.:.....|.|. .|:..|.|:.||::||               :|:|..      .|....::.
Mouse   804 EAAALYNLVDGQLHDLVTASNQLLRRLEL---------------RVRLGH------LETAIHQVS 847

  Fly   327 DWILHNRDVFQMSYVEIGHNYSVAKSLQDEHQKFAVASMNVSVNIDRILAVAARLIESQHYAAQH 391
            ||:....   ..|...:...:..|::::..|.:|.          |..|.|||:           
Mouse   848 DWMAGEG---SQSLQALAPVHVCAETVEKVHAEFE----------DFFLQVAAQ----------- 888

  Fly   392 IKTLAQRLDRTWKDFAAGLDERTAVLQLSVLFHHKAEQYCNSVASWAAACQASQP------LPSD 450
                          :..|||......||........|.....:|::|:..||.|.      :.::
Mouse   889 --------------YRQGLDLSKQAAQLGAAEEGAGEMGLPDLAAFASTQQAFQARLTHFYMAAE 939

  Fly   451 IQ--SLETAIRTHQSLYEAMCQAYTEVHSTSKKLLYQLDHLVQVCNQPPPPGVPDHRKNSNNGSF 513
            .|  .|||.:..|:     ..:..:..|...:.||.||                         |.
Mouse   940 RQRTDLETLLHLHR-----FRRKMSRFHMDCQNLLTQL-------------------------SL 974

  Fly   514 NKYERQNPAADYSEGASHVLAVIH-QILSHHRTLEAKWHQERLRLHQTLALRLFQEDVKQVLDWL 577
            .|..:.:|...           :| ::..:.:.|.:::..|:|     ||::|            
Mouse   975 GKAVKASPGDQ-----------LHLRLHCYLKRLASEFQTEKL-----LAMKL------------ 1011

  Fly   578 KNHGEVFLRKNTGIGRNFHKARVYQTSHDNFENVAQNTYSNAQKLLAAADELARSGEADPNEIYS 642
                :|......|:|:     .|::.        ||..:...|.||..|.......|....::..
Mouse  1012 ----QVASLSRPGLGQ-----EVWEE--------AQERHQEIQSLLRKALAYCPCPEVPATQVAL 1059

  Fly   643 VARELELQVGSFAERVEQRRRRLDMAVIFYTHEKDVTAWIDKLRTDVSTDETRLSQENLEGIERI 707
            :.|...:..|....|                              :|.:...|..|::| .::.:
Mouse  1060 IDRSRPVAKGQGLPR------------------------------EVGSKWDRSLQDSL-AVDHV 1093

  Fly   708 LQQYQRDQQESSVNVCLTTIS-----QGEALLQEMRSLEYADNTGSIAALEATLEKL 759
            .:..:..|.|.|.|:....:|     .|:.  :|:|        |:....:.|||:|
Mouse  1094 FKSQRTPQGEQSRNMWAGLLSPEPGQSGDT--EEVR--------GTPKLPDPTLERL 1140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trioNP_651960.2 SEC14 13..152 CDD:214706 43/146 (29%)
SPEC 314..>468 CDD:238103 28/161 (17%)
SPEC 563..778 CDD:238103 32/202 (16%)
SPEC 782..997 CDD:238103
SPEC 897..1119 CDD:238103
SPEC 1125..1226 CDD:197544
RhoGEF 1287..1455 CDD:459876
PH1_Kalirin_Trio_like 1462..1584 CDD:270060
SH3_Kalirin_1 1643..1707 CDD:212786
RhoGEF 1945..2121 CDD:459876
PH2_Kalirin_Trio_p63RhoGEF 2130..2260 CDD:270061
D630003M21RikNP_808325.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 302..405
PHA03247 <303..646 CDD:223021 27/81 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 419..451
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 511..551
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1095..1134 9/48 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1148..1187
Blue background indicates that the domain is not in the aligned region.

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