Sequence 1: | NP_651960.2 | Gene: | trio / 43974 | FlyBaseID: | FBgn0024277 | Length: | 2263 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001021496.1 | Gene: | unc-73 / 171988 | WormBaseID: | WBGene00006805 | Length: | 2488 | Species: | Caenorhabditis elegans |
Alignment Length: | 2368 | Identity: | 660/2368 - (27%) |
---|---|---|---|
Similarity: | 1123/2368 - (47%) | Gaps: | 359/2368 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 DGQ---RARDLLTLLQERVVFLTGGRDRRGGPLLCFPATPRRDRLKPEDLRRLLSYLISIPSDAA 63
Fly 64 KNLGFTVIIDMRGNGNCSTNVKTILKVLQEHFSANIHNVVIIKPDNFWQKQRASISSHKYKFETT 128
Fly 129 TVSIESLNKIVESHQLTGDFEGQQLYDHQQWTDARLAIEDFFWQAGDMADRIDDLQEDLNRNDFA 193
Fly 194 EDVPLARHAIDHHNEMRKKITKLPIEDLDMQGKKLLAKINAMAPPGGQAPTNSGGPDMDSGPSSA 258
Fly 259 GQQSQPSQQSRSVGGNPDMSAAVNKALRQIELIHTGQEKLLMLWQHKKVKLDQCFQWRLFEQDCE 323
Fly 324 KMFDWILHNRDVFQMSYVEIGHNYSVAKSLQDEHQKFAVASMNVSVNIDRILAVA--ARLIESQH 386
Fly 387 YAAQHIKTLAQRLDRTWKDFAAGLDERTAVLQLSVLFHHKAEQYCNSVASWAAACQASQP--LPS 449
Fly 450 DI----QSLETAIRTHQSLYEAMCQAYTEVHSTSKKLLYQLDHLVQVCNQPPPPGVPDHRKNSNN 510
Fly 511 GSFNKYERQNPAADYSEGASHVLAVIHQILSHHRTLEAKWHQERLRLHQTLALRLFQEDVKQVLD 575
Fly 576 WLKNHGEVFLRKNTGIGRNFHKARVYQTSHDNFENVAQNTYSNAQKLLAAADELARSGE--ADPN 638
Fly 639 EIYSVARELELQVGSFAERVEQRRRRLDMAVIFYTHEKDVTAWIDKL-------RTDVST---DE 693
Fly 694 TRLSQENLEGIERILQQYQRDQQESSVNVCLTTISQGEALLQEMRSLEY---ADNTGSIAALEAT 755
Fly 756 LEKLNKQKVELEELWSARKFRADLILRLRYFERDARLLSVQMEMWSEELQH-ADLSRDYQKAEQL 819
Fly 820 IRMHNESVTEIQNATYEVVQQGQDLLQLFENAGFISMADATHTAQARIEYLLDFLRE--REIDLE 882
Fly 883 E---MSEAKRA--KLEQAVQLCQFQNDANQVISWIRNGEAMLVASFVTPN----SLQEAEQLRKG 938
Fly 939 HEQFQIAIEKTHTSAVQVKYRADALIN--ANHYDPLSIDEI---SDDVTKKWQQLVTYAEERHKL 998
Fly 999 VTASINFYKTAE-QVCSVLDSLEREYKRE--DDWCDGGGGS---DKAQAIVQLISKHQEQKEAFL 1057
Fly 1058 KACTLARRTAETFLKYANRSQQCYQYKGNCEGHVKSKLDKLLTQENQVLDYWTLRKKSLDQCQQF 1122
Fly 1123 VLFERSAKQAIEWIHNTGEAYLSSRSNLVGISKEETEGLLKEHNEFRSTAKETRERVKLLIQLAD 1187
Fly 1188 SLVEKGHAHASDIKQWVASVDQRYKDFSNRMDSYCEQLEKSLGMSQQQLLLGSDGN--SSISSSS 1250
Fly 1251 GDRHSDPTL--EAKLNSSNKENKEINEEKRKSARRKEFIMAELMQTERAYVNDLATCIKCFLEEF 1313
Fly 1314 -RAGK--SVPSALIGQEDVIFGNIKEIHHFHQKIFLRELEKYETMPEDVGHCFVTWASKF-DMYV 1374
Fly 1375 HYCKNKPTSNNLLVQHGG-SFFEELQRR--LEVDHPLPAYLIKPVQRITKYQLLLKDLLSCCEES 1436
Fly 1437 HGEIKEGLEVMLNVPKKANDAMHLSLLENCDVSVDKLGEVVLQDAFQAWDTKQIIR-KGRERRVF 1500
Fly 1501 LFELYLLFAK--EVKESNVVKYQFKSK-LMTTDMGITEHIEGDETKFAVWTGRSPMLSDCRIVLK 1562
Fly 1563 ATSLETKQIWVKKLREV----------MQETCFSGT-----SLTLPKSPAKHSGSSQRSSRDLDE 1612
Fly 1613 QLTENDHDRCSLASFGSGNTTDSDNKLGNQEATWVV-ADYIATSGSNE--LSVSKGQQVEIVEPP 1674
Fly 1675 TAGEPDFCLVRLNPQHDDAAVQEGLVPVSVLKPPPGSHKHGSGTAANAASSAGSQKSDMQ---DQ 1736
Fly 1737 SNRSKADALSSSTKRRGFSGRNWLPLMNRKGTDKPPSSKPLVKKPSEKNLRTPQKHAEELAEQQN 1801
Fly 1802 QQPGASPATVLPSSQFPSSTQHPGGAGAGDYEP--------------DEEVGLELPPPMKPIQEP 1852
Fly 1853 HLI----ANGPPAFAKDAKESSGNMASPGKMDGNPLSEIEEIVKTTTEQHESNSRVDGGGGVENA 1913
Fly 1914 STNGHGRSHDNNDESHTAVSDKAAALKKRQCVFAELMSTEEAYVQDLHEIVNGYMTEINNTNSDI 1978
Fly 1979 PMPEDLKGGKMKLVFNNIKDIYEWHRDFFLRALRNCQKSPADLG-PLIKRSATKFALYYTYCSNK 2042
Fly 2043 PLSEYIVSA--HYQYFDSIRQKLGHRLDLSNLIIKPVQRITKYELLIKEIIKATEGAGLYKEVPM 2105
Fly 2106 LQEAYQQMKVVVKTVNDMMVVLRSLQDFDGEITAQGSLLMQGPM---NCVVDAAQKHRELQVFLF 2167
Fly 2168 QQIIIFADIEKTKNQYASPIFKYRSHIQLNHMQMK-ELGD--CRFQIRSTDPKIPEMTIICQAAS 2229
Fly 2230 QENYAGWRDMLNKILQQQNDLIFMLSNP 2257 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trio | NP_651960.2 | SEC14 | 13..152 | CDD:214706 | 53/138 (38%) |
SPEC | 314..>468 | CDD:238103 | 41/161 (25%) | ||
SPEC | 563..778 | CDD:238103 | 63/229 (28%) | ||
SPEC | 782..997 | CDD:238103 | 48/231 (21%) | ||
SPEC | 897..1119 | CDD:238103 | 64/236 (27%) | ||
SPEC | 1125..1226 | CDD:197544 | 21/100 (21%) | ||
RhoGEF | 1287..1456 | CDD:279015 | 69/175 (39%) | ||
PH1_Kalirin_Trio_like | 1462..1584 | CDD:270060 | 49/135 (36%) | ||
PH | 1495..1580 | CDD:278594 | 37/97 (38%) | ||
SH3_Kalirin_1 | 1643..1707 | CDD:212786 | 23/66 (35%) | ||
RhoGEF | 1945..2122 | CDD:279015 | 71/179 (40%) | ||
PH2_Kalirin_Trio_p63RhoGEF | 2130..2260 | CDD:270061 | 44/134 (33%) | ||
unc-73 | NP_001021496.1 | SEC14 | 19..156 | CDD:214706 | 53/139 (38%) |
SPEC | 422..568 | CDD:295325 | 54/181 (30%) | ||
SPEC | 849..1063 | CDD:295325 | 62/221 (28%) | ||
RhoGEF | 1208..1383 | CDD:238091 | 70/186 (38%) | ||
PH-like | 1391..1509 | CDD:302622 | 48/119 (40%) | ||
PH | 1419..1511 | CDD:278594 | 38/93 (41%) | ||
SH3 | 1575..1634 | CDD:302595 | 23/75 (31%) | ||
RhoGEF | 1813..1986 | CDD:279015 | 71/179 (40%) | ||
PH2_Kalirin_Trio_p63RhoGEF | 1990..2128 | CDD:270061 | 46/138 (33%) | ||
I-set | 2305..2391 | CDD:254352 | |||
Ig | 2335..2392 | CDD:299845 | |||
FN3 | 2395..2473 | CDD:214495 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 124 | 1.000 | Domainoid score | I3448 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H20847 | |
Inparanoid | 1 | 1.050 | 812 | 1.000 | Inparanoid score | I246 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S5434 |
OMA | 1 | 1.010 | - | - | QHG46230 | |
OrthoDB | 1 | 1.010 | - | - | D4513at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002562 | |
OrthoInspector | 1 | 1.000 | - | - | oto19629 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103664 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR22826 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3053 |
SonicParanoid | 1 | 1.000 | - | - | X1686 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.960 |