DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment trio and LOC101886810

DIOPT Version :10

Sequence 1:NP_651960.2 Gene:trio / 43974 FlyBaseID:FBgn0024277 Length:2263 Species:Drosophila melanogaster
Sequence 2:XP_021325545.2 Gene:LOC101886810 / 101886810 -ID:- Length:1516 Species:Danio rerio


Alignment Length:1066 Identity:240/1066 - (22%)
Similarity:395/1066 - (37%) Gaps:349/1066 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1190 VEKGHAHASDIKQWVASVDQRYKDFSNRMDS-YCEQLEKSLGMSQQQLLLGSDGNSSISSSSGDR 1253
            |..|.|..:.:...:.|...||.. |..||| :|.....|.            |::|.|:||.|.
Zfish    19 VPVGGAVLNQVSGPIRSSALRYCS-SRSMDSTHCSDRPVSY------------GSTSSSASSRDS 70

  Fly  1254 H----------SDP-----------------TLEAKLNSSNKENKEINEE---KRKSARRKEF-- 1286
            |          |.|                 .||.:..|..|..|..|::   :....|:.::  
Zfish    71 HCSLGGRPVLGSTPERDRDSGAIRLELVPARQLEEEEESGRKTRKLTNQDAEIQSPEGRKVQYVD 135

  Fly  1287 -IMAELMQTERAYVNDLATCIKCFLEEFRAGKSVPSALIGQED--VIFGNIKEIHHFHQKIFLRE 1348
             ::.|:::||:.||.||.:.::.:|:.. :.:|:  .|:|.|:  .:||||::|:.|:.:: ||:
Zfish   136 RVVEEILETEKTYVQDLRSIVQDYLDCI-SNQSL--LLLGDEERNSLFGNIRDIYRFNSEL-LRD 196

  Fly  1349 LEKYETMPEDVGHCFVTWASKFDMYVHYCKNKPTS--------NNLLVQHGGSFFEELQRRLEVD 1405
            |||....|..:..|||..:..|.:|..||.|.|.|        .|.:|   ..|..|.|..|:..
Zfish   197 LEKCNANPVAIAKCFVAKSEDFHIYTQYCTNYPRSVAVLTECMRNKMV---AKFLRERQESLKHS 258

  Fly  1406 HPLPAYLIKPVQRITKYQLLLKDLLSCCE---ESHGEIKEGLEVMLNVPKKAND-------AMHL 1460
            .||.:||:||||||.||.|||.::.:..|   |.:..|:|.::.|..|....||       |:.|
Zfish   259 LPLGSYLLKPVQRILKYHLLLHEIATHLEKDSEMYDVIQEAIDTMQRVAWHINDMKRKHEHAVRL 323

  Fly  1461 ----SLLENCDVSVDKL--GEVVLQDAFQAWDTKQIIRKGRERRVFLFELYLLFAKEVKESNVVK 1519
                |||.|.. ..|.:  ||:||:..|      :|.|...||.:|||:..||..|:.:|:    
Zfish   324 QEIQSLLTNWK-GPDLIGYGELVLEGTF------RIQRAKNERTLFLFDKLLLITKKREET---- 377

  Fly  1520 YQFKSKLMTTDMGITEHIEGDETKFAVWTGRSPMLSDCRIVLKATSLETKQIWVKKLREVMQETC 1584
            |.:|:.::..::.:.|.|..:...|:|:..::|.|..   .::|.|.:.|::||..|:.::.|. 
Zfish   378 YTYKAHILCCNLMLVEVIPKEPLSFSVFHYKNPKLQH---TVQAKSQQDKKMWVLHLKRLILEN- 438

  Fly  1585 FSGTSLTLPKSPAK-----------------HSGSS--------------QRSSRDLDEQLTEND 1618
                  ...|.|||                 |:...              :|.:..|.:.|..:.
Zfish   439 ------HPAKIPAKAKQAILEMDTANHPSFNHNSDDKRVNTKEGPSPRRVRRKTEPLSKLLKNSK 497

  Fly  1619 H--------DRCS--------LASFGS-----------------GNTTDSDNKLGNQEATWVVAD 1650
            |        .|.|        :||.||                 |:.:|.|::...|:|      
Zfish   498 HIISSPDIQKRSSFGVTLLSPVASLGSIGRSRSLVSESQESLDPGDHSDVDDEPNTQDA------ 556

  Fly  1651 YIATSGSNELSVSKGQQVEIVEPPTAGEPDFCLVRLNPQ---------------HDDAAVQEGLV 1700
                ...::..:|.|.::.:   |..|...    |||.|               |.|....:..:
Zfish   557 ----DDEDDTGLSSGGKLRV---PGKGSRK----RLNQQVSVDSIEQWRNNDLTHADLQTAKQSL 610

  Fly  1701 PVSVLKP-------PPGS--HKH-----GSGTA-----------ANAASSAGSQKS----DMQD- 1735
            ...|:.|       ||.|  .:|     |:|.|           ...|.....|||    |.:| 
Zfish   611 QNKVITPPILRVTAPPESDGDEHLRAMLGTGQAPAFCNIWTDHRVRRAMFPTRQKSFQIDDDEDI 675

  Fly  1736 -------QSNRSKADALS------------------SSTKRRGFSGRNWLPLMNRKGTDKPPSSK 1775
                   ::..|..||.|                  :.|.|.|..||..|...|..|        
Zfish   676 YQMFLPTENEVSSHDAESDHETADHPERPCSWHVEPTKTSRLGLPGRGVLRRANSFG-------- 732

  Fly  1776 PLVKKPSEKNLRTPQKHAEELAEQQ-----NQQPGASPATVLPSSQFPSSTQHPGGAGAGDYEPD 1835
               ::||.:.:.|.|...||....|     |:..|:|.|..|.:....:...:.      .:|..
Zfish   733 ---EEPSGQEIPTKQSLEEEEINNQTESSSNEISGSSSAEQLTADDIENVYDNI------SFEEL 788

  Fly  1836 EEVGL-------ELPPPMKPIQEPHLIANGPPAFAKDAKESSGNMASPGKMDGNPLSEIE-EIVK 1892
            :.:||       ...|.:||:..|.:|..     ..:.:.|.|:..|.|: :|.|....| :|| 
Zfish   789 QAMGLIRKDQVNHAVPEVKPMIAPQVIIT-----PTETESSCGSNRSSGQ-EGEPFETCELQIV- 846

  Fly  1893 TTTEQHESNSRVDGGGGVENASTNGHGRSHDN------------NDESHTAVSDKAAALKKRQCV 1945
                ::|.|                   .:|.            :||...|:     .|:..   
Zfish   847 ----ENEEN-------------------VYDTIVFQECPVIAAPSDEGKPAI-----VLRSE--- 880

  Fly  1946 FAELMSTEEAYVQDLHEIVNGYMTEIN---NTNSDIP---MPEDLKGGKMKLVFNNIKDIYEWHR 2004
             |::::|:.:         .|:::|.|   .|.:|..   :|.|::..::....|.::.:.|...
Zfish   881 -ADIIATQNS---------GGFVSEENLCTKTKTDFEHPHVPSDIETSQLSSADNTLEQVDEIWT 935

  Fly  2005 DFFLRALRNCQKSPADLGPLIKRSAT 2030
            | ....:|..:|.|..|......|.|
Zfish   936 D-LENYIRKNEKKPDKLPAAFPVSGT 960

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trioNP_651960.2 SEC14 13..152 CDD:214706
SPEC 314..>468 CDD:238103
SPEC 563..778 CDD:238103
SPEC 782..997 CDD:238103
SPEC 897..1119 CDD:238103
SPEC 1125..1226 CDD:197544 11/36 (31%)
RhoGEF 1287..1455 CDD:459876 61/180 (34%)
PH1_Kalirin_Trio_like 1462..1584 CDD:270060 35/123 (28%)
SH3_Kalirin_1 1643..1707 CDD:212786 12/78 (15%)
RhoGEF 1945..2121 CDD:459876 18/92 (20%)
PH2_Kalirin_Trio_p63RhoGEF 2130..2260 CDD:270061
LOC101886810XP_021325545.2 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.