| Sequence 1: | NP_651960.2 | Gene: | trio / 43974 | FlyBaseID: | FBgn0024277 | Length: | 2263 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_012811994.1 | Gene: | arhgef25 / 100170494 | XenbaseID: | XB-GENE-6084380 | Length: | 753 | Species: | Xenopus tropicalis |
| Alignment Length: | 639 | Identity: | 178/639 - (27%) |
|---|---|---|---|
| Similarity: | 281/639 - (43%) | Gaps: | 156/639 - (24%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1735 DQSNRSKADALSSSTKRRGFSGRNWLPLMNRKGTDKPPSSKPLVKKPSEKNLRTPQKHAEELAEQ 1799
Fly 1800 QNQQPGASPATVLPSSQFPSSTQHPGGA------------GAGDYEPDEEVGLELPPPMKPIQEP 1852
Fly 1853 HLIA------NGPPAFAKDAKESSGNMASPGKMDGNPLSEIEEIVKTTTEQHESNSRVD------ 1905
Fly 1906 -------GGGGVENASTNGHGRSHD---------------------------------------- 1923
Fly 1924 ------NNDESHTA-VSD-----------------------KAAALKKRQCVFAELMSTEEAYVQ 1958
Fly 1959 DLHEIVNGYMTEINNTNSDIPMPEDLKGGKMKLVFNNIKDIYEWHRDFFLRALRNCQKSPADLGP 2023
Fly 2024 LIKRSATKFALYYTYCSNKPLSEYIVSAHYQ-YFDSIRQKLGHRLDLSNLIIKPVQRITKYELLI 2087
Fly 2088 KEIIKATEGAGLYKEVPMLQEAYQQMKVVVKTVNDMMVVLRSLQDFDGEITAQGSLLMQGPMNCV 2152
Fly 2153 VDAAQ-----KHRELQVFLFQQIIIFADIEKTKNQYASPIFKYRSHIQLNHMQMKELGD---CRF 2209
Fly 2210 QIRSTDPKIPEMTIICQAASQENYAGWRDMLNKILQQQNDLIFMLSNPLSTKNK 2263 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| trio | NP_651960.2 | SEC14 | 13..152 | CDD:214706 | |
| SPEC | 314..>468 | CDD:238103 | |||
| SPEC | 563..778 | CDD:238103 | |||
| SPEC | 782..997 | CDD:238103 | |||
| SPEC | 897..1119 | CDD:238103 | |||
| SPEC | 1125..1226 | CDD:197544 | |||
| RhoGEF | 1287..1456 | CDD:279015 | |||
| PH1_Kalirin_Trio_like | 1462..1584 | CDD:270060 | |||
| PH | 1495..1580 | CDD:278594 | |||
| SH3_Kalirin_1 | 1643..1707 | CDD:212786 | |||
| RhoGEF | 1945..2122 | CDD:279015 | 78/177 (44%) | ||
| PH2_Kalirin_Trio_p63RhoGEF | 2130..2260 | CDD:270061 | 42/137 (31%) | ||
| arhgef25 | XP_012811994.1 | SH3-RhoG_link | 103..>214 | CDD:406906 | 21/125 (17%) |
| RhoGEF | 287..457 | CDD:395496 | 78/176 (44%) | ||
| PH2_Kalirin_Trio_p63RhoGEF | 462..601 | CDD:270061 | 43/141 (30%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 148 | 1.000 | Domainoid score | I4422 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R5215 |
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 2.030 | |||||