Sequence 1: | NP_651960.2 | Gene: | trio / 43974 | FlyBaseID: | FBgn0024277 | Length: | 2263 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012819807.1 | Gene: | trio / 100170157 | XenbaseID: | XB-GENE-922516 | Length: | 3085 | Species: | Xenopus tropicalis |
Alignment Length: | 2357 | Identity: | 1023/2357 - (43%) |
---|---|---|---|
Similarity: | 1453/2357 - (61%) | Gaps: | 230/2357 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 DGQRARDLLTLLQERVVFLTGGRDRRGGPLLCFPATPRRDRLKPEDLRRLLSYLISIPSDAAKNL 66
Fly 67 GFTVIIDMRGNGNCSTNVKTILKVLQEHFSANIHNVVIIKPDNFWQKQRASISSHKYKFETTTVS 131
Fly 132 IESLNKIVESHQLTGDFEGQQLYDHQQWTDARLAIEDFFWQAGDMADRIDDLQEDLNRNDFAEDV 196
Fly 197 PLARHAIDHHNEMRKKITKLPIEDLDMQGKKLLAKINAMAPPGGQAPTNSGGPDMDSGPSSAGQQ 261
Fly 262 SQPSQQSRSVGGNPDMSAAVNKALRQIELIHTGQEKLLMLWQHKKVKLDQCFQWRLFEQDCEKMF 326
Fly 327 DWILHNRDVFQMSYVEIGHNYSVAKSLQDEHQKFAVASMNVSVNIDRILAVAARLIESQHYAAQH 391
Fly 392 IKTLAQRLDRTWKDFAAGLDERTAVLQLSVLFHHKAEQYCNSVASWAAACQASQPLPSDIQSLET 456
Fly 457 AIRTHQSLYEAMCQAYTEVHSTSKKLLYQLDHLVQVCNQPPPPGVPDHRKNSNNGSFNKYERQNP 521
Fly 522 AADYSEGASHVLAVIHQILSHHRTLEAKWHQERLRLHQTLALRLFQEDVKQVLDWLKNHGEVFLR 586
Fly 587 KNTGIGRNFHKARVYQTSHDNFENVAQNTYSNAQKLLAAADELARSGEADPNEIYSVARELELQV 651
Fly 652 GSFAERVEQRRRRLDMAVIFYTHEKDVTAWIDKLRTDVSTDETRLSQENLEGIERILQQYQRDQQ 716
Fly 717 ESSVNVCLTTISQGEALLQEMRSLEYADN----TGSIAALEATLEKLNKQKVELEELWSARKFRA 777
Fly 778 DLILRLRYFERDARLLSVQMEMWSEEL--QHADL-SRDYQKAEQLIRMHNESVTEIQNATYEVVQ 839
Fly 840 QGQDLLQL---FENAGFISMADATHTAQARIEYLLDFLREREIDLEEMSEAKRAKLEQAVQLCQF 901
Fly 902 QNDANQVISWIRNGEAMLVASFVTPNSLQEAEQLRKGHEQFQIAIEKTHTSAVQVKYRADALINA 966
Fly 967 NHYDPLSIDEISDDVTKKWQQLVTYAEERHKLVTASINFYKTAEQVCSVLDSLEREYKREDDWCD 1031
Fly 1032 GGGGSDK------AQAIVQLISKHQEQKEAFLKACTLARRTAETFLKYANRSQQCYQYKGNCEG- 1089
Fly 1090 --HVKSK-------LDKLLTQENQVLDYWTLRKKSLDQCQQFVLFERSAKQAIEWIHNTGEAYLS 1145
Fly 1146 SRSNLVGISKEETEGLLKEHNEFRSTAKETRERVKLLIQLADSLVEKGHAHASDIKQWVASVDQR 1210
Fly 1211 YKDFSNRMDSYCEQLEKSLGMSQQQLLLGSDGNSS-------ISSSSGDRHSDPTLEAKLNSSNK 1268
Fly 1269 ENKEINEEKRKSARRKEFIMAELMQTERAYVNDLATCIKCFLEEFRAG-KSVPSALIGQEDVIFG 1332
Fly 1333 NIKEIHHFHQKIFLRELEKYETMPEDVGHCFVTWASKFDMYVHYCKNKPTSNNLLVQHGGSFFEE 1397
Fly 1398 LQRRLEVDHPLPAYLIKPVQRITKYQLLLKDLLSCCEESHGEIKEGLEVMLNVPKKANDAMHLSL 1462
Fly 1463 LENCDVSVDKLGEVVLQDAFQAWDTKQIIRKGRERRVFLFELYLLFAKEVKESN-VVKYQFKSKL 1526
Fly 1527 MTTDMGITEHIEGDETKFAVWTGRSPMLSDCRIVLKATSLETKQIWVKKLREVMQETC------- 1584
Fly 1585 -----FSGTSLTLPKSPAKHSGSSQRSSRDLDEQLT-ENDHDRCSLASFGSGNTTDSDNKLGNQE 1643
Fly 1644 ATWVVADYIATSGSNELSVSKGQQVEIVEPPTAGEPDFCLVRLNPQHDDAAVQEGLVPVSVL--- 1705
Fly 1706 -----KPPPG--SHKHGSGTAANAASSAGSQKSDMQDQSNRSKADALSSSTKRRGFSGRNWL--P 1761
Fly 1762 LMN-----------------------RKGTDKPPSSKPLVKKPSEKNLRTPQKHAEELAEQQNQQ 1803
Fly 1804 PGASPATVLPSSQFPSSTQHPGGAGAGDYEPDEEVGLELPPPMKPIQEPHLIANGPPAFAKDAKE 1868
Fly 1869 SSGNMASPGKMD----GNPLSEIEEIVKT--TTEQHESNSRVDGGGGVENASTNGHGRSHDNNDE 1927
Fly 1928 SHTAVSD----KAAALKKRQCVFAELMSTEEAYVQDLHEIVNGYMTEINNTNSDIPMPEDLKGGK 1988
Fly 1989 MKLVFNNIKDIYEWHRDFFLRALRNCQKSPADLGPLIKRSATKFALYYTYCSNKPLSEYIVSAHY 2053
Fly 2054 Q-YFDSIRQKLGHRLDLSNLIIKPVQRITKYELLIKEIIKATEGAGLYKEVPMLQEAYQQMKVVV 2117
Fly 2118 KTVNDMMVVLRSLQDFDGEITAQGSLLMQGPMNCVVDAA---QKHRELQVFLFQQIIIFADIEKT 2179
Fly 2180 KNQYASPIFKYRSHIQLNHMQMKELGD---CRFQIRSTDPKIPEMTIICQAASQENYAGWRDMLN 2241
Fly 2242 KILQQQNDLIFMLSNPL 2258 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
trio | NP_651960.2 | SEC14 | 13..152 | CDD:214706 | 77/138 (56%) |
SPEC | 314..>468 | CDD:238103 | 84/153 (55%) | ||
SPEC | 563..778 | CDD:238103 | 89/218 (41%) | ||
SPEC | 782..997 | CDD:238103 | 96/220 (44%) | ||
SPEC | 897..1119 | CDD:238103 | 128/237 (54%) | ||
SPEC | 1125..1226 | CDD:197544 | 59/100 (59%) | ||
RhoGEF | 1287..1456 | CDD:279015 | 104/169 (62%) | ||
PH1_Kalirin_Trio_like | 1462..1584 | CDD:270060 | 67/122 (55%) | ||
PH | 1495..1580 | CDD:278594 | 49/85 (58%) | ||
SH3_Kalirin_1 | 1643..1707 | CDD:212786 | 28/71 (39%) | ||
RhoGEF | 1945..2122 | CDD:279015 | 77/177 (44%) | ||
PH2_Kalirin_Trio_p63RhoGEF | 2130..2260 | CDD:270061 | 42/135 (31%) | ||
trio | XP_012819807.1 | SEC14 | 64..199 | CDD:214706 | 74/134 (55%) |
SPEC | 215..440 | CDD:238103 | 91/224 (41%) | ||
SPEC | 336..561 | CDD:238103 | 108/224 (48%) | ||
SPEC | 562..778 | CDD:238103 | 91/215 (42%) | ||
SPEC | 782..1009 | CDD:238103 | 98/236 (42%) | ||
SPEC | 903..1132 | CDD:238103 | 124/234 (53%) | ||
SPEC | 1138..1238 | CDD:197544 | 59/109 (54%) | ||
RhoGEF | 1289..1459 | CDD:238091 | 90/177 (51%) | ||
PH1_Kalirin_Trio_like | 1466..1588 | CDD:270060 | 80/122 (66%) | ||
SH3_Kalirin_1 | 1654..1713 | CDD:212786 | 24/59 (41%) | ||
SH3-RhoG_link | 1710..1967 | CDD:293215 | 85/297 (29%) | ||
RhoGEF | 1965..2138 | CDD:238091 | 74/177 (42%) | ||
PH2_Kalirin_Trio_p63RhoGEF | 2143..2281 | CDD:270061 | 48/143 (34%) | ||
SH3_Kalirin_2 | 2543..2601 | CDD:212787 | |||
I-set | 2673..2764 | CDD:254352 | |||
Ig | 2687..2764 | CDD:299845 | |||
STKc_Trio_C | 2776..3038 | CDD:271015 | |||
S_TKc | 2784..3038 | CDD:214567 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 230 | 1.000 | Domainoid score | I2405 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H20847 | |
Inparanoid | 1 | 1.050 | 1713 | 1.000 | Inparanoid score | I69 |
OMA | 1 | 1.010 | - | - | QHG46230 | |
OrthoDB | 1 | 1.010 | - | - | D4513at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002562 | |
OrthoInspector | 1 | 1.000 | - | - | otm49408 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1686 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.980 |