DRSC/TRiP Functional Genomics Resources

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Protein Alignment trio and mcf2l2

DIOPT Version :10

Sequence 1:NP_651960.2 Gene:trio / 43974 FlyBaseID:FBgn0024277 Length:2263 Species:Drosophila melanogaster
Sequence 2:XP_073772492.1 Gene:mcf2l2 / 100149630 ZFINID:ZDB-GENE-100812-1 Length:1284 Species:Danio rerio


Alignment Length:1466 Identity:341/1466 - (23%)
Similarity:568/1466 - (38%) Gaps:329/1466 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   510 NGSFNKYERQNPAADYSEGASHVLAVIH--QILSHHRTLEAKWHQERLRLHQTLALR---LFQED 569
            ||......|.:....||:|||..|..|.  ::.|:||.|       .:.|...||.|   :.|::
Zfish     2 NGYQTAQSRCSVCGLYSQGASFTLVRISAGEMESYHRFL-------GVCLETELATRRNEIMQQE 59

  Fly   570 VKQVL--DWLKNHGEVFLRKNTGIGRNFHKARVY-------QTSHDNFENVAQNTYSNAQKLLAA 625
            ::.:|  |.::.....|...:.|.|:.......:       :.|.::|.||.  ||..:...:.|
Zfish    60 IRPLLAVDIIEQLHRQFALLSGGRGQEGSPIITFPEFSGFNEVSDEDFINVV--TYLTSIPSMDA 122

  Fly   626 AD-----ELARSGEADPNEIYSVARELELQVGSFAERVEQRRRRLDMAVIFYTHEKDVTAWIDKL 685
            |.     .|.|..:...:.|.|:||    ..|||.       ..|.:.::.     ..:.::.:.
Zfish   123 ASIGFIIILDRRKDKWNSAIASLAR----IAGSFP-------GNLQLVLVL-----KPSRFLQRA 171

  Fly   686 RTDVSTDETRLSQENLEGIERILQQYQRDQQESSVNVCLTTISQGEALLQEMRSLE-YADNTGSI 749
            ..|||                  .:..||..:..|.:         .:|..:..|. |.|.....
Zfish   172 IADVS------------------MRLHRDDFKLKVPI---------VMLNSLSDLHGYIDKGQLT 209

  Fly   750 AALEATLEKLNKQKVELEELWSARKFRADLILRLRYFERDARLLSVQMEMWSEELQHADLSRDYQ 814
            ..|..||:..:.|       |...:      ..:..|....:..:..::.:..:|...:|..|.|
Zfish   210 CDLGGTLDYCHSQ-------WIHHR------TAIENFALTVKSTAQMLQQFGTDLAETELPNDVQ 261

  Fly   815 KAEQLIRMHNESVTEIQNATYEVVQQGQDLL-----QLFENAGFISMADATHTAQARIEYLLDFL 874
            ..:.|:..|.|...::::.....|:||..||     |..:....|...|.... |..:|.||..|
Zfish   262 CTKDLLITHTEKHDKLKDELKLAVKQGNTLLSCIKDQATKAESHILNPDEVEN-QTTVERLLAQL 325

  Fly   875 REREIDLEEMSEAKRAKLEQAVQLCQFQNDANQV-ISWIRNGEAMLVASFVTPNSLQEAEQ---- 934
            .|.|...|:.......||||.:||..|:.|..:| :|.....||:|..| .|.:.:...||    
Zfish   326 DETENAFEQFWSRHHLKLEQCLQLRHFEQDFKEVKVSLDGLSEALLGLS-DTGDCVARVEQLLGE 389

  Fly   935 LRKGHEQFQIAIEKTHTSAVQVKYRADALINANHYDPLSID----------EISDDVTKKWQQLV 989
            |:...::.|..:||....|    ...|.||.:|||   :||          .|.||.:.:     
Zfish   390 LKTLEDKAQECLEKAQLQA----QHGDQLIQSNHY---AIDSIRPKCVELRRICDDFSNE----- 442

  Fly   990 TYAEERHKLVTASINFYKTAEQVCSVLDSLEREYKREDDWCDGGGGSDKAQAIVQLISKHQEQKE 1054
              |:::..::|.|:...|..::|              :.||:.|.....:||:.:  .:.||..|
Zfish   443 --AKKKRDVLTKSLEILKRIDEV--------------NQWCESGVYLLASQAVDR--CQTQEGAE 489

  Fly  1055 AFLKACTLARRTAETFLKYANRSQQCYQYKGNCEGHVKSKLDKLLTQENQVLDYWTLRKKSLDQC 1119
            |       |.:..|.::|.|...|             .|.|.:|..|...||.            
Zfish   490 A-------ALQDIERYMKTAKEQQ-------------LSHLKELNNQYEVVLS------------ 522

  Fly  1120 QQFVLFERSAKQAIEWIHNTGEAYLSSRSNLVGISKEETEGLLKEHNEFRSTAKETRERVKLLIQ 1184
               .|.:...:.|::.:::..|.:....::|..:|.::|..:........|:.|....::     
Zfish   523 ---ELLKSKVQTALKTLNDVQEMFEKRHASLKKLSTKQTRPVQPVAPRPESSPKRPSPKI----- 579

  Fly  1185 LADSLVEKGHAHASDIKQWVASVDQRYKDFSNRMDSYCE-----QLEKSLGMSQQQLLL--GSDG 1242
             ........|...:|            ...:||..|..|     .:.|:.|..:.:::.  |..|
Zfish   580 -PHPTPPTSHRKTTD------------NSSTNRQPSDAELAKRKNIRKAKGGIKIEVMHEGGQGG 631

  Fly  1243 NSSISSSSGDRHSDPTLEAKLNSSNKENKEINEEKRKSARRKEFIMAELMQTERAYVNDLATCIK 1307
            :|.|..:                        ||.:...:.|:..||.||::|||.||.:|.:.|:
Zfish   632 SSHILMN------------------------NETEESLSNRRSHIMNELIETERLYVEELQSIIE 672

  Fly  1308 CF---LEEFRAGKSVPSALIGQEDVIFGNIKEIHHFHQKIFLRELEKYETMPEDVGHCFVTWASK 1369
            .:   |::......:|.:|..:::|:|||:.||:.|||||||:|||.....||.||.||:....:
Zfish   673 GYAAALDDPELIYLIPPSLENKKEVLFGNLPEIYQFHQKIFLKELENSAEKPELVGTCFLKRKEE 737

  Fly  1370 FDMYVHYCKNKPTSNNLLVQHGGS-FFEELQRRLEVDHPLPAYLIKPVQRITKYQLLLKDLLSCC 1433
            ..:|..||:|||.|..|..|.|.| ||:|.|:||:....|.|||:|||||||||||:||::|.|.
Zfish   738 LQIYEKYCQNKPRSEALWRQCGDSMFFQECQKRLDHKLSLDAYLLKPVQRITKYQLMLKEMLKCS 802

  Fly  1434 EESHG--EIKEGLEVMLNVPKKANDAMHLSLLENCDVSVDKLGEVVLQDAFQAW--------DTK 1488
            :...|  |::|....:|::.|..||:||...:...:.|::.||::::|.:|..|        ..|
Zfish   803 KNPEGTAELEEAQATVLDIIKSVNDSMHQIAITGFEGSLNDLGKLLMQGSFNVWTDHKKGHSKVK 867

  Fly  1489 QIIR-KGRERRVFLFELYLLFAKEVKE-----SNVVKYQFKSKLMTTDMGITEHIEGDETKFAVW 1547
            .:.| |..:|.:||:...:||.|:.:|     .....|.||..|....:||||:::||..||.:|
Zfish   868 DLARFKPMQRHLFLYHKMILFCKKREEMTDGHEKSPSYSFKHSLKMGSVGITENVKGDIKKFEIW 932

  Fly  1548 -TGRSPMLSDCRIVLKATSLETKQIWVKKLREVMQ---ETCFSGTSL------TLPKSPAKHSGS 1602
             .||..:     .:::|.|::.|..||.::|:|:.   |.|...:.|      .:..:|.::  .
Zfish   933 YNGREEV-----YIIQAPSMDVKNTWVSEIRKVLTSQLEACREASQLHQKITENIYHAPMRN--M 990

  Fly  1603 SQRSSRDLDEQLTENDHDRCSLASFGSGNTTDSDNKLGNQEATWVVADYIATSGSNELSVSKGQQ 1667
            .:.:.|..|....|..:.|............|:.:.||::.|......:.....||..|:.    
Zfish   991 RKTALRQSDSSSPETGYRRSDSGPNMRQKRADASSSLGSERAALPRKRFTLQGLSNRRSLP---- 1051

  Fly  1668 VEIVEPPTAGEPDFCLVRLNPQHDDAAVQEGLVPVSVLKPPPGSHKHGSGTAANAASSAGSQKSD 1732
               .||.             |:..:...:..|....           ||.||....:..   .|.
Zfish  1052 ---AEPA-------------PKETEVTRRFSLASTV-----------GSATAPRTKAPL---SSS 1086

  Fly  1733 MQDQSNRSKAD----ALSSSTKRRGF---SGRNWLPLMNR-KGTDKPPSSKPLV----KKPSEKN 1785
            ::.:.::.|:|    ....:||.|||   :.|:.||...: ||:.   .|||.|    .:|....
Zfish  1087 LKSKRHQIKSDPTPFGYEGATKTRGFKKETMRDSLPAERKSKGSG---GSKPAVPRSASQPGWSQ 1148

  Fly  1786 LRTPQKHAEEL---------------AEQQNQQPGASPATVLPSSQFPSSTQHPGGAGAGDYE-- 1833
            .|.|...||:.               .|.:................:.|.|.......|||:.  
Zfish  1149 RRLPSMDAEDFETIPSSAEELSISSDGEDEGHNKNGDNDRYQVQLTYESGTAQDLSVEAGDFVQF 1213

  Fly  1834 -PDEEVGLELPPPMKPIQEPHLIANGPPAFAKDAKE 1868
             .:.|.||.|...:: .|:..|:   ||...:...|
Zfish  1214 LEESENGLWLVKNLR-TQKTGLV---PPTVLQSTAE 1245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trioNP_651960.2 SEC14 13..152 CDD:214706
SPEC 314..>468 CDD:238103
SPEC 563..778 CDD:238103 40/232 (17%)
SPEC 782..997 CDD:238103 58/234 (25%)
SPEC 897..1119 CDD:238103 54/236 (23%)
SPEC 1125..1226 CDD:197544 13/105 (12%)
RhoGEF 1287..1455 CDD:459876 77/173 (45%)
PH1_Kalirin_Trio_like 1462..1584 CDD:270060 39/139 (28%)
SH3_Kalirin_1 1643..1707 CDD:212786 8/63 (13%)
RhoGEF 1945..2121 CDD:459876
PH2_Kalirin_Trio_p63RhoGEF 2130..2260 CDD:270061
mcf2l2XP_073772492.1 None
Blue background indicates that the domain is not in the aligned region.

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