DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lip1 and Lipm

DIOPT Version :9

Sequence 1:NP_001285811.1 Gene:Lip1 / 43973 FlyBaseID:FBgn0023496 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_076392.1 Gene:Lipm / 78753 MGIID:1926003 Length:422 Species:Mus musculus


Alignment Length:392 Identity:126/392 - (32%)
Similarity:210/392 - (53%) Gaps:35/392 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 LQRKNIKQDSTLSVDKLIAKYGYESEVHHVTTEDGYILTMHRI-------RKQGA-PPFLLQHGL 111
            |..|....::.::|.::|...||.||.:.|.|||||||:::||       :|:|: |..||||||
Mouse    36 LPTKAADPEAFMNVSEIIKHKGYPSEEYEVATEDGYILSVNRIPRGQTRLKKEGSRPVVLLQHGL 100

  Fly   112 VDSSAGFVVMGPNVSLAYLLADHNYDVWLGNARGNRYSRNHTTLDPDESKFWDFSWHEIGMYDLP 176
            :..::.::...||.||.::|||..:|||:||:|||.:||.|.||..|:.:||.||:.|:..:|||
Mouse   101 LGDASNWISNLPNNSLGFILADAGFDVWMGNSRGNTWSRKHKTLSIDQDEFWAFSYDEMARFDLP 165

  Fly   177 AMIDHVLKVTGFPKLHYAGHSQGCTSFFVMCSMRPAYNDKVVSMQALAPAVYAKETEDHPYIRAI 241
            |:|:.:|:.||..|::|.|:|||.|..|:..|..|....|:....||||....|      |.|:.
Mouse   166 AVINFILQKTGQKKVYYVGYSQGTTMGFIAFSTMPELAHKIKMYFALAPIATVK------YARSP 224

  Fly   242 SLYFNSLVGSSIREMFNGE------------FRFLC-RMTEETERLCIEAVFGIVGRNWNEFNRK 293
            ...|..|....|:.:|..:            |.:|| :|.  .:::|...:..:.|.|.|..|..
Mouse   225 GTKFLLLPDMMIKVLFGRQEFLYQTRFFRQLFIYLCGQMI--LDQICSNIILLLGGFNTNNMNMS 287

  Fly   294 MFPVILGHYPAGVAAKQVKHFIQIIKSGRFAPYSY-SSNKNMQLYRDHLPPRYNLSLVTVPTFVY 357
            ...|.:.|.|||.:.:.:.|:.|.:.||....:.: |..||.:......|.||.:..:.|||.::
Mouse   288 RANVYVAHTPAGTSVQNILHWSQAVNSGELRAFDWGSETKNQEKCNQPTPIRYKVRDMMVPTAMW 352

  Fly   358 YSTNDLLCHPKDVESMCDDLGNVTGKYLVPQKEFNHMDFLWAIDVRKMLYRRMLQVLGK---VPE 419
            ....|.|.:|.||:::..::.|:.....:|  |:.|:||:|.:|..:.:|..::.::.:   :|:
Mouse   353 TGGQDWLSNPDDVKTLLSEVTNLIYHKNIP--EWAHVDFIWGLDAPQRVYNEIIHLMKQEPNLPQ 415

  Fly   420 GS 421
            |:
Mouse   416 GT 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lip1NP_001285811.1 Abhydro_lipase 71..122 CDD:282003 24/58 (41%)
Abhydrolase_1 103..399 CDD:278959 101/309 (33%)
LipmNP_076392.1 PLN02872 50..408 CDD:215470 121/367 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831840
Domainoid 1 1.000 227 1.000 Domainoid score I2491
eggNOG 1 0.900 - - E2759_KOG2624
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 278 1.000 Inparanoid score I2905
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55134
OrthoDB 1 1.010 - - D408561at33208
OrthoFinder 1 1.000 - - FOG0000083
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11005
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X80
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.910

Return to query results.
Submit another query.