DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lip1 and Lipf

DIOPT Version :9

Sequence 1:NP_001285811.1 Gene:Lip1 / 43973 FlyBaseID:FBgn0023496 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_080610.1 Gene:Lipf / 67717 MGIID:1914967 Length:395 Species:Mus musculus


Alignment Length:394 Identity:141/394 - (35%)
Similarity:212/394 - (53%) Gaps:52/394 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 RLQRKNIKQDSTLSVDKLIAKYGYESEVHHVTTEDGYILTMHRI---RKQG-----APPFLLQHG 110
            :|..||  .::.::|.::|..:||.||.:.|.|||||||.::||   :|..     .|...||||
Mouse    22 KLGPKN--PEANMNVSQMITYWGYPSEEYEVVTEDGYILGVYRIPYGKKNSENIGKRPVAYLQHG 84

  Fly   111 LVDSSAGFVVMGPNVSLAYLLADHNYDVWLGNARGNRYSRNHTTLDPDESKFWDFSWHEIGMYDL 175
            |:.|:..::...||.|||::|||..|||||||:|||.:||.:....||..:||.||:.|:..|||
Mouse    85 LIASATNWITNLPNNSLAFILADAGYDVWLGNSRGNTWSRKNVYYSPDSVEFWAFSFDEMAKYDL 149

  Fly   176 PAMIDHVLKVTGFPKLHYAGHSQGCTSFFVMCSMRPAYNDKVVSMQALAPAVYAKETEDHPYIRA 240
            ||.||.:::.||..|:||.|||||.|..|:..|..||...|:....||||....|.||. |: :.
Mouse   150 PATIDFIVQKTGQEKIHYVGHSQGTTIGFIAFSTNPALAKKIKRFYALAPVATVKYTES-PF-KK 212

  Fly   241 ISL-------------------YFNSLVGSSI--REMFNGEFRFLCRMTEETERLCIEAVFGIVG 284
            |||                   |.:..:|:.:  ||:.              :.||..|:|...|
Mouse   213 ISLIPKFLLKVIFGNKMFMPHNYLDQFLGTEVCSRELL--------------DLLCSNALFIFCG 263

  Fly   285 RNWNEFNRKMFPVILGHYPAGVAAKQVKHFIQIIKSGRFAPYSYSSN-KNMQLYRDHLPPRYNLS 348
            .:....|...|.|.|||.|||.:.:.:.|:.|:.|||:...|::.|. :||..|....||.|::|
Mouse   264 FDKKNLNVSRFDVYLGHNPAGTSTQDLFHWAQLAKSGKLQAYNWGSPLQNMLHYNQKTPPYYDVS 328

  Fly   349 LVTVPTFVYYSTNDLLCHPKDVESMCDDLGNVT-GKYLVPQKEFNHMDFLWAIDVRKMLYRRMLQ 412
            .:|||..|:...:|:|..|:||..:...|.|:. .|.::|   :||:||:||:|..:.:|..::.
Mouse   329 AMTVPIAVWNGGHDILADPQDVAMLLPKLPNLLYHKEILP---YNHLDFIWAMDAPQEVYNEIVT 390

  Fly   413 VLGK 416
            ::.:
Mouse   391 MMAE 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lip1NP_001285811.1 Abhydro_lipase 71..122 CDD:282003 23/58 (40%)
Abhydrolase_1 103..399 CDD:278959 117/318 (37%)
LipfNP_080610.1 PLN02872 35..389 CDD:215470 137/372 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831810
Domainoid 1 1.000 227 1.000 Domainoid score I2491
eggNOG 1 0.900 - - E2759_KOG2624
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 278 1.000 Inparanoid score I2905
Isobase 1 0.950 - 0 Normalized mean entropy S2026
OMA 1 1.010 - - QHG55134
OrthoDB 1 1.010 - - D408561at33208
OrthoFinder 1 1.000 - - FOG0000083
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11005
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X80
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.860

Return to query results.
Submit another query.