DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lip1 and lipa

DIOPT Version :9

Sequence 1:NP_001285811.1 Gene:Lip1 / 43973 FlyBaseID:FBgn0023496 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_001015847.2 Gene:lipa / 548564 XenbaseID:XB-GENE-952977 Length:409 Species:Xenopus tropicalis


Alignment Length:373 Identity:124/373 - (33%)
Similarity:190/373 - (50%) Gaps:28/373 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 DSTLSVDKLIAKYGYESEVHHVTTEDGYILTMHRI------RKQGAPPFL-LQHGLVDSSAGFVV 120
            ::|:::.:||...||.||.:.|.|||||||:::||      ..:|..|.: |||||:...:.:|.
 Frog    44 EATMNISELIRYRGYPSEEYEVLTEDGYILSVNRIPHGVKYASEGPKPVVFLQHGLLADGSNWVT 108

  Fly   121 MGPNVSLAYLLADHNYDVWLGNARGNRYSRNHTTLDPDESKFWDFSWHEIGMYDLPAMIDHVLKV 185
            ...|.||.::|||..||||:||:|||.:||.|.:|.||:.:||.||:.|:...||||::|.:.|.
 Frog   109 NLENNSLGFILADAGYDVWIGNSRGNTWSRKHKSLSPDQEEFWAFSYDELAKKDLPAVVDFITKK 173

  Fly   186 TGFPKLHYAGHSQGCTSFFVMCSMRPAYNDKVVSMQALAPAVYAKETEDHPYIRAISLYFNSLVG 250
            ||..::.|.|||||.|..|:..|..|....|:.....|||....|.::. |..:     ...|..
 Frog   174 TGQEQIFYVGHSQGTTIAFIAFSSLPQLAKKIKMYFGLAPVATVKFSKS-PLAK-----LGVLPE 232

  Fly   251 SSIREMF-NGEF-----------RFLCRMTEETERLCIEAVFGIVGRNWNEFNRKMFPVILGHYP 303
            ..|.|:| .|||           ...|......| ||....|.:.|.|....|.....|...|.|
 Frog   233 FLIEELFGKGEFLPQTYLITWLATHFCTHAIADE-LCGNIFFLLSGFNEKNLNMSRVNVYSSHCP 296

  Fly   304 AGVAAKQVKHFIQIIKSGRFAPYSYSSNKNMQLYRDHLPPRYNLSLVTVPTFVYYSTNDLLCHPK 368
            ||.:.:.:.|:.|.::||....:.:.:..||..|....||.|::..:||||.::...||.|...|
 Frog   297 AGTSVQNMLHWRQGVRSGELKAFDFGTKGNMIHYNQTTPPFYHVRDMTVPTALWTGGNDWLADRK 361

  Fly   369 DVESMCDDLGNVTGKYLVPQKEFNHMDFLWAIDVRKMLYRRMLQVLGK 416
            ||..:...:.|:.....:|  ::.|:||:|.:|..:.:|..::.::.|
 Frog   362 DVALLLTQVSNLVYHKEIP--DWEHLDFIWGLDAPERMYNEIIAMMKK 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lip1NP_001285811.1 Abhydro_lipase 71..122 CDD:282003 24/57 (42%)
Abhydrolase_1 103..399 CDD:278959 102/308 (33%)
lipaNP_001015847.2 Abhydro_lipase 49..110 CDD:282003 24/60 (40%)
PLN02872 50..409 CDD:215470 123/367 (34%)
Abhydrolase_5 91..>229 CDD:289465 57/143 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 222 1.000 Domainoid score I2528
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55134
OrthoDB 1 1.010 - - D408561at33208
OrthoFinder 1 1.000 - - FOG0000083
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11005
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X80
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.030

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